Detailed information NTG0345144

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: C9E88_RS01690
• Genome accession: NZ_CP035934
• Coordinates: 372390..373448 (+)
• Length: 352 a.a.
• NCBI ID: WP_106983927.1
• Uniprot ID: -
• Organism: Acinetobacter cumulans strain WCHAc060092
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 367390..378448

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C9E88_RS01675 (C9E88_002595)	mraY	367633..368751 (+)	1119	WP_106983924.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
C9E88_RS01680 (C9E88_002590)	-	368821..369624 (+)	804	WP_106983925.1	putative RNA methyltransferase	-
C9E88_RS01685 (C9E88_002585)	ponA	369697..372225 (-)	2529	WP_106983926.1	penicillin-binding protein PBP1a	-
C9E88_RS01690 (C9E88_002580)	comM	372390..373448 (+)	1059	WP_106983927.1	pilus assembly protein PilM	Machinery gene
C9E88_RS01695 (C9E88_002575)	pilN	373448..374101 (+)	654	WP_106983928.1	PilN domain-containing protein	Machinery gene
C9E88_RS01700 (C9E88_002570)	pilO	374098..374796 (+)	699	WP_106983929.1	type 4a pilus biogenesis protein PilO	Machinery gene
C9E88_RS01705 (C9E88_002565)	pilP	374796..375323 (+)	528	WP_106983930.1	pilus assembly protein PilP	Machinery gene
C9E88_RS01710 (C9E88_002560)	pilQ	375340..377430 (+)	2091	WP_106983931.1	type IV pilus secretin PilQ family protein	Machinery gene
C9E88_RS01715 (C9E88_002555)	-	377518..378018 (+)	501	WP_240627350.1	shikimate kinase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38845.50 Da
• Isoelectric Point: 4.5297

>NTDB_id=345144 C9E88_RS01690 WP_106983927.1 372390..373448(+) (comM) [Acinetobacter cumulans strain WCHAc060092]
MLRLYRKPNKGLIGVDISSTSVKVLELSVKGGRHWVESYALVPLQEGSVVEKNILNPEAVGDSLERAINLANTQSSNAAF
AIPTSMVITKVIEMDADMTSDEREVQIRMDAEQYIPFPLDEASLDFEVLPDVLSNPNRVNVLLVATLIENIEGRSEVLEM
AGLTPKIADVESFALENAFKVFSDTLPMGVKTVGILDIGHSMTTLYVMQNNKVIYSREQVFGGKQLTQEIQNRYGLSFEE
AGRAKKTRALPDDYDVEVLEPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLLVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=345144 C9E88_RS01690 WP_106983927.1 372390..373448(+) (comM) [Acinetobacter cumulans strain WCHAc060092]
GTGCTCAGGTTATATCGTAAGCCAAATAAGGGGTTAATAGGAGTAGATATTAGTTCAACTTCTGTTAAGGTTCTGGAACT
TTCTGTAAAAGGCGGCAGGCATTGGGTCGAAAGCTATGCTTTGGTACCACTGCAAGAAGGCAGTGTTGTTGAAAAAAATA
TCTTAAACCCTGAAGCGGTTGGGGATTCTCTTGAGCGCGCAATTAATTTAGCCAATACGCAATCTTCAAATGCAGCATTT
GCAATTCCAACATCTATGGTGATCACAAAGGTCATTGAGATGGATGCGGATATGACAAGTGATGAGCGTGAAGTACAAAT
TCGTATGGATGCTGAACAATACATTCCATTCCCGCTGGATGAAGCAAGTCTAGATTTTGAAGTTCTCCCTGACGTTTTAT
CTAATCCAAATCGCGTTAATGTTTTATTGGTTGCAACGCTGATTGAAAATATCGAAGGGCGTTCTGAAGTTTTAGAAATG
GCGGGTTTAACACCTAAAATTGCGGATGTCGAAAGTTTTGCATTAGAAAATGCCTTTAAGGTTTTTTCAGATACGCTACC
GATGGGTGTAAAAACGGTTGGGATTTTAGATATTGGTCATAGCATGACGACCTTATATGTAATGCAAAACAATAAAGTTA
TCTACAGTCGTGAACAGGTATTTGGTGGTAAACAACTTACCCAAGAAATTCAAAACCGTTATGGTCTTTCTTTTGAAGAA
GCTGGGCGTGCGAAAAAAACGCGTGCTTTACCAGACGATTATGATGTTGAAGTATTAGAGCCTTTTCTAGAGGCCGTAGT
GCAACAAGCTGCACGTTCATTACAATTCTTCTTTTCATCTTCACAGTTCAATGAAATTGATCATATTTTATTGGCTGGGG
GAAATGCCAATATTCCAGGTCTTGCAAAATTGTTACAACAAAAGCTGGGATATCGAGTCACGATTGCCAATCCATTCTTA
CAAATGGGTTTTTCACCTCAAATTGATATTAAAAAAATTGAAAATGATGCTTCATCATTATTGGTGGCATGTGGCTTAGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	82.102	100	0.821
pilM	Acinetobacter baumannii D1279779	81.818	100	0.818
comM	Acinetobacter baylyi ADP1	78.125	100	0.781
pilM	Legionella pneumophila strain ERS1305867	40.616	100	0.412