Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | C9E88_RS01695 | Genome accession | NZ_CP035934 |
| Coordinates | 373448..374101 (+) | Length | 217 a.a. |
| NCBI ID | WP_106983928.1 | Uniprot ID | - |
| Organism | Acinetobacter cumulans strain WCHAc060092 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 368448..379101
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E88_RS01680 (C9E88_002590) | - | 368821..369624 (+) | 804 | WP_106983925.1 | putative RNA methyltransferase | - |
| C9E88_RS01685 (C9E88_002585) | ponA | 369697..372225 (-) | 2529 | WP_106983926.1 | penicillin-binding protein PBP1a | - |
| C9E88_RS01690 (C9E88_002580) | comM | 372390..373448 (+) | 1059 | WP_106983927.1 | pilus assembly protein PilM | Machinery gene |
| C9E88_RS01695 (C9E88_002575) | pilN | 373448..374101 (+) | 654 | WP_106983928.1 | PilN domain-containing protein | Machinery gene |
| C9E88_RS01700 (C9E88_002570) | pilO | 374098..374796 (+) | 699 | WP_106983929.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| C9E88_RS01705 (C9E88_002565) | pilP | 374796..375323 (+) | 528 | WP_106983930.1 | pilus assembly protein PilP | Machinery gene |
| C9E88_RS01710 (C9E88_002560) | pilQ | 375340..377430 (+) | 2091 | WP_106983931.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| C9E88_RS01715 (C9E88_002555) | - | 377518..378018 (+) | 501 | WP_240627350.1 | shikimate kinase | - |
Sequence
Protein
Download Length: 217 a.a. Molecular weight: 24218.56 Da Isoelectric Point: 5.1210
>NTDB_id=345145 C9E88_RS01695 WP_106983928.1 373448..374101(+) (pilN) [Acinetobacter cumulans strain WCHAc060092]
MAKINLLPWRDELREKRKKEFIAICIGAFFLGVIAAAAVWFYYDQKLQDQEQANQLIVSTNQNLDVQLKSLDGLQEQRNA
IIERMKLIQGLQSQRPIAVHLIDELVRVVPSNVYITRFTRAGDKFTFEGKAESPNAVAEFLRNLEASPWYRNAFMNSFLA
VEVNKDQAPKSVVPRVEESYGNFVVTADLDTIPQPVANAEGSATGADSAASTAEVAK
MAKINLLPWRDELREKRKKEFIAICIGAFFLGVIAAAAVWFYYDQKLQDQEQANQLIVSTNQNLDVQLKSLDGLQEQRNA
IIERMKLIQGLQSQRPIAVHLIDELVRVVPSNVYITRFTRAGDKFTFEGKAESPNAVAEFLRNLEASPWYRNAFMNSFLA
VEVNKDQAPKSVVPRVEESYGNFVVTADLDTIPQPVANAEGSATGADSAASTAEVAK
Nucleotide
Download Length: 654 bp
>NTDB_id=345145 C9E88_RS01695 WP_106983928.1 373448..374101(+) (pilN) [Acinetobacter cumulans strain WCHAc060092]
ATGGCAAAAATTAACTTACTCCCTTGGCGCGATGAGCTAAGAGAGAAACGAAAAAAAGAATTTATTGCGATTTGCATTGG
GGCATTTTTTCTAGGGGTTATTGCAGCAGCTGCGGTTTGGTTCTACTACGATCAGAAATTACAAGATCAAGAGCAAGCCA
ATCAGTTGATTGTGAGTACTAACCAAAATTTAGATGTGCAGTTAAAGTCACTCGATGGTTTGCAAGAACAACGTAATGCA
ATTATTGAACGCATGAAGCTCATTCAAGGTTTACAAAGCCAACGTCCAATCGCAGTACATCTGATAGATGAATTGGTTCG
TGTGGTACCGAGTAATGTTTATATTACAAGGTTTACTCGAGCTGGAGATAAGTTTACTTTTGAAGGTAAGGCGGAAAGTC
CAAACGCTGTTGCAGAATTTTTGCGTAATTTGGAAGCTTCACCTTGGTATCGAAATGCTTTCATGAATTCGTTCTTGGCT
GTTGAAGTAAATAAAGATCAAGCCCCAAAATCCGTGGTTCCTCGTGTTGAAGAAAGTTATGGTAATTTTGTGGTCACTGC
AGATCTAGATACGATCCCACAACCCGTAGCAAATGCAGAAGGAAGTGCTACAGGAGCTGATTCAGCAGCATCTACAGCGG
AGGTGGCGAAATGA
ATGGCAAAAATTAACTTACTCCCTTGGCGCGATGAGCTAAGAGAGAAACGAAAAAAAGAATTTATTGCGATTTGCATTGG
GGCATTTTTTCTAGGGGTTATTGCAGCAGCTGCGGTTTGGTTCTACTACGATCAGAAATTACAAGATCAAGAGCAAGCCA
ATCAGTTGATTGTGAGTACTAACCAAAATTTAGATGTGCAGTTAAAGTCACTCGATGGTTTGCAAGAACAACGTAATGCA
ATTATTGAACGCATGAAGCTCATTCAAGGTTTACAAAGCCAACGTCCAATCGCAGTACATCTGATAGATGAATTGGTTCG
TGTGGTACCGAGTAATGTTTATATTACAAGGTTTACTCGAGCTGGAGATAAGTTTACTTTTGAAGGTAAGGCGGAAAGTC
CAAACGCTGTTGCAGAATTTTTGCGTAATTTGGAAGCTTCACCTTGGTATCGAAATGCTTTCATGAATTCGTTCTTGGCT
GTTGAAGTAAATAAAGATCAAGCCCCAAAATCCGTGGTTCCTCGTGTTGAAGAAAGTTATGGTAATTTTGTGGTCACTGC
AGATCTAGATACGATCCCACAACCCGTAGCAAATGCAGAAGGAAGTGCTACAGGAGCTGATTCAGCAGCATCTACAGCGG
AGGTGGCGAAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
67.907 |
99.078 |
0.673 |
| comN | Acinetobacter baylyi ADP1 |
69.118 |
94.009 |
0.65 |