Detailed information NTG0344944

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: GEV49_RS34735
• Genome accession: NZ_CP045547
• Coordinates: 7724456..7725109 (-)
• Length: 217 a.a.
• NCBI ID: WP_153181245.1
• Uniprot ID: -
• Organism: Streptomyces sp. SYP-A7193
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 7719456..7730109

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GEV49_RS34705 (GEV49_35015)	-	7720527..7720955 (-)	429	WP_153182103.1	hypothetical protein	-
GEV49_RS34710 (GEV49_35020)	-	7720952..7721536 (-)	585	WP_153181242.1	PRC-barrel domain-containing protein	-
GEV49_RS34715 (GEV49_35025)	-	7721705..7722160 (+)	456	WP_153181243.1	ATP-binding protein	-
GEV49_RS34720 (GEV49_35030)	-	7722191..7723078 (-)	888	WP_153182104.1	RNA polymerase sigma factor SigF	-
GEV49_RS34725 (GEV49_35035)	-	7723333..7723791 (+)	459	WP_153181244.1	helix-turn-helix domain-containing protein	-
GEV49_RS34730 (GEV49_35040)	clpP	7723852..7724454 (-)	603	WP_054100107.1	ClpP family protease	Regulator
GEV49_RS34735 (GEV49_35045)	clpP	7724456..7725109 (-)	654	WP_153181245.1	ATP-dependent Clp protease proteolytic subunit	Regulator
GEV49_RS34740 (GEV49_35050)	-	7725319..7725801 (+)	483	WP_153181246.1	VOC family protein	-
GEV49_RS34745 (GEV49_35055)	-	7725895..7726692 (+)	798	WP_153181247.1	VOC family protein	-
GEV49_RS34750 (GEV49_35060)	-	7726724..7727428 (+)	705	WP_153181248.1	ribonuclease H family protein	-
GEV49_RS34755 (GEV49_35065)	-	7727526..7728788 (+)	1263	WP_381499589.1	FAD-dependent monooxygenase	-
GEV49_RS34760 (GEV49_35070)	-	7728801..7729784 (+)	984	WP_153181250.1	aldo/keto reductase	-

Sequence

Protein

• Length: 217 a.a.
• Molecular weight: 23513.54 Da
• Isoelectric Point: 4.9104

>NTDB_id=344944 GEV49_RS34735 WP_153181245.1 7724456..7725109(-) (clpP) [Streptomyces sp. SYP-A7193]
MSPLFTGPAPAASPRAEEGDTPATRFDDRLAEQLLDQRIVLLGTQVDEVSANRVCAQLLILSAQDPRTDISLYVNSPGGS
VHAGLAIYDTMRLIPNDVSTLAMGFAASMGQFLLSVGTAGKRYALPNARIMMHQPSAGIGGTTADIEIQADNLEFTKRTM
ERITAEHTGQSAETISRDGDRDRWFTAEEAREYGMVDRVVQSFADVRPAAAKRRMGL

Nucleotide

• Length: 654 bp

>NTDB_id=344944 GEV49_RS34735 WP_153181245.1 7724456..7725109(-) (clpP) [Streptomyces sp. SYP-A7193]
ATGTCTCCACTCTTCACCGGCCCGGCCCCGGCCGCATCCCCCAGGGCCGAGGAGGGCGACACCCCCGCGACCCGGTTCGA
CGACCGGCTCGCCGAGCAGTTGCTCGACCAGCGGATCGTGCTGCTGGGCACGCAGGTCGACGAGGTCTCCGCGAACCGGG
TCTGCGCCCAGTTGCTCATCCTGTCCGCGCAGGACCCGCGCACCGACATCAGCCTGTACGTCAACAGTCCCGGCGGCTCC
GTGCACGCGGGGCTCGCCATCTACGACACCATGCGGCTGATCCCCAACGACGTCTCGACGCTGGCCATGGGGTTCGCCGC
CAGCATGGGGCAGTTCCTGCTGAGCGTCGGCACGGCGGGCAAGCGCTACGCGCTGCCGAACGCGCGGATCATGATGCACC
AGCCGTCTGCGGGCATCGGCGGCACCACCGCCGACATCGAGATCCAGGCGGACAACCTGGAGTTCACCAAGCGCACCATG
GAGCGGATCACCGCCGAGCACACCGGTCAGAGCGCCGAGACCATCTCCCGGGACGGCGACCGCGACCGCTGGTTCACGGC
CGAGGAGGCCAGGGAGTACGGAATGGTGGACCGGGTCGTGCAGTCCTTCGCGGATGTGCGCCCGGCCGCCGCCAAGCGAC
GGATGGGGCTGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (30-201)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	49.714	80.645	0.401
clpP	Streptococcus pneumoniae TIGR4	50.588	78.341	0.396
clpP	Streptococcus pneumoniae Rx1	50.588	78.341	0.396
clpP	Streptococcus pneumoniae D39	50.588	78.341	0.396
clpP	Streptococcus pneumoniae R6	50.588	78.341	0.396
clpP	Lactococcus lactis subsp. cremoris KW2	48.256	79.263	0.382
clpP	Streptococcus pyogenes JRS4	48.256	79.263	0.382
clpP	Streptococcus pyogenes MGAS315	48.256	79.263	0.382
clpP	Streptococcus thermophilus LMD-9	47.399	79.724	0.378
clpP	Streptococcus thermophilus LMG 18311	47.399	79.724	0.378
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.235	78.341	0.378
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	47.674	79.263	0.378