Detailed information NTG0343678

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: GB851_RS01220
• Genome accession: NZ_CP045141
• Coordinates: 249817..250434 (-)
• Length: 205 a.a.
• NCBI ID: WP_003789242.1
• Uniprot ID: -
• Organism: Kingella kingae strain F41215CHC
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 244817..255434

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GB851_RS01195 (GB851_01250)	-	245619..245936 (+)	318	WP_003789233.1	hypothetical protein	-
GB851_RS01200 (GB851_01255)	msrAB	246035..247609 (+)	1575	WP_003787346.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
GB851_RS01205 (GB851_01260)	-	247688..248632 (-)	945	WP_164538036.1	class I SAM-dependent methyltransferase	-
GB851_RS01210 (GB851_01265)	-	248728..249348 (-)	621	WP_003787352.1	LysE family translocator	-
GB851_RS01215 (GB851_01270)	-	249355..249732 (-)	378	WP_003787354.1	hypothetical protein	-
GB851_RS01220 (GB851_01275)	clpP	249817..250434 (-)	618	WP_003789242.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
GB851_RS01225 (GB851_01280)	-	250484..251317 (-)	834	WP_003787359.1	transporter associated domain-containing protein	-
GB851_RS01230 (GB851_01285)	ybeY	251357..251869 (-)	513	WP_038310502.1	rRNA maturation RNase YbeY	-
GB851_RS01235 (GB851_01290)	-	251935..253146 (-)	1212	WP_164538037.1	MFS transporter	-
GB851_RS01250 (GB851_01305)	-	253513..254877 (+)	1365	WP_223877584.1	3'-5' exonuclease	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 22635.98 Da
• Isoelectric Point: 5.0776

>NTDB_id=343678 GB851_RS01220 WP_003789242.1 249817..250434(-) (clpP) [Kingella kingae strain F41215CHC]
MLDIQNNTLIPTVIEQSGRGERAFDIYSRLLKERIIFLVGPVNDQTANLVVAQMLFLESENPDKDIYFYINSPGGSVTAG
MSIYDTMKFIKPDVQTLCLGQAASMGAFLLSAGTKGKRFALPNSRVMIHQPLISGGLGGQASDIEIHARELLKLKEKLNQ
MLAEHTGKTLAEVERDTDRDNFMSAQEAIEYGLIDKVITSRNEVA

Nucleotide

• Length: 618 bp

>NTDB_id=343678 GB851_RS01220 WP_003789242.1 249817..250434(-) (clpP) [Kingella kingae strain F41215CHC]
ATGTTAGACATTCAAAACAACACCTTAATCCCCACCGTGATTGAACAAAGCGGACGTGGCGAACGCGCTTTTGACATTTA
TTCACGCCTGTTAAAAGAGCGCATTATTTTCTTGGTGGGCCCTGTGAACGACCAAACCGCCAATTTGGTTGTGGCGCAAA
TGCTGTTTTTGGAAAGCGAAAACCCCGACAAAGACATTTATTTTTACATCAATAGCCCAGGTGGCAGCGTAACCGCAGGC
ATGAGCATTTATGACACGATGAAATTCATTAAACCCGATGTGCAAACTTTGTGCTTGGGTCAAGCGGCGAGCATGGGCGC
GTTTTTGCTGTCGGCTGGCACAAAAGGCAAGCGTTTCGCCCTGCCCAATAGCCGCGTGATGATTCATCAACCGTTGATTA
GTGGTGGCTTGGGTGGTCAAGCGTCTGATATTGAAATTCATGCGCGTGAGTTATTGAAATTAAAAGAAAAACTGAATCAA
ATGTTAGCAGAACACACAGGCAAAACCCTTGCCGAAGTGGAACGCGACACCGACCGCGATAATTTCATGTCGGCGCAAGA
AGCGATAGAATATGGTTTGATTGATAAGGTGATTACGTCTCGCAACGAAGTCGCATAA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (19-200)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	68.063	93.171	0.634
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.368	92.683	0.624
clpP	Streptococcus thermophilus LMD-9	56.25	93.659	0.527
clpP	Streptococcus thermophilus LMG 18311	56.25	93.659	0.527
clpP	Streptococcus pneumoniae D39	55.67	94.634	0.527
clpP	Streptococcus pneumoniae Rx1	55.67	94.634	0.527
clpP	Streptococcus pneumoniae R6	55.67	94.634	0.527
clpP	Streptococcus pneumoniae TIGR4	55.67	94.634	0.527
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.789	92.683	0.517
clpP	Streptococcus pyogenes JRS4	55.789	92.683	0.517
clpP	Lactococcus lactis subsp. cremoris KW2	55.789	92.683	0.517
clpP	Streptococcus pyogenes MGAS315	55.789	92.683	0.517
clpP	Streptococcus mutans UA159	54.974	93.171	0.512