Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   F7V86_RS07235 Genome accession   NZ_CP044444
Coordinates   1385248..1386075 (+) Length   275 a.a.
NCBI ID   WP_004264723.1    Uniprot ID   A7Z0F5
Organism   Bacillus amyloliquefaciens strain KC41     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1380248..1391075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F7V86_RS07210 - 1381323..1382756 (+) 1434 WP_071181493.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  F7V86_RS07215 tmk 1382753..1383391 (+) 639 WP_007615155.1 dTMP kinase -
  F7V86_RS07220 darA 1383462..1383791 (+) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  F7V86_RS07225 - 1383804..1384244 (+) 441 WP_004264730.1 YaaR family protein -
  F7V86_RS07230 holB 1384256..1385245 (+) 990 WP_007409919.1 DNA polymerase III subunit delta' -
  F7V86_RS07235 yaaT 1385248..1386075 (+) 828 WP_004264723.1 competence/sporulation regulator complex protein RicT Regulator
  F7V86_RS07240 yabA 1386090..1386449 (+) 360 WP_017419498.1 replication initiation-control protein YabA -
  F7V86_RS07245 - 1386510..1387253 (+) 744 WP_004264717.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  F7V86_RS07250 - 1387240..1387539 (+) 300 WP_007409921.1 GIY-YIG nuclease family protein -
  F7V86_RS07255 rsmI 1387514..1388395 (+) 882 WP_017419497.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  F7V86_RS07260 abrB 1388445..1388735 (-) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31160.93 Da        Isoelectric Point: 4.6504

>NTDB_id=342641 F7V86_RS07235 WP_004264723.1 1385248..1386075(+) (yaaT) [Bacillus amyloliquefaciens strain KC41]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEVCQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=342641 F7V86_RS07235 WP_004264723.1 1385248..1386075(+) (yaaT) [Bacillus amyloliquefaciens strain KC41]
TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGAAAAATTTATTATTTTGATCCGAACGGATTTGATATAGAACA
AGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTCGAATACGGGCAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAGGTCATACGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAG
GAGGCCCTGTCCGCTTTTGAAGTCTGTCAGAAAAAAGTGGCTGACCACGGCTTAGATATGAAGCTGGTTGATGTTGAGTT
TACATTTGACCGCAATAAAGTCATTTTTTACTTTACAGCAGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCTATCTTTAAAACGAGAATCGAATTGCGCCAAATCGGGGTGAGGGACGAGGCGAAAATGCTCGGCGGTATCGGACCA
TGCGGGAGAATGCTTTGCTGCTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGATCAAAATTT
ATCGTTGAACCCAACGAAGATTTCCGGTCTGTGCGGCCGTTTGATGTGCTGTTTGAAGTACGAAAATGATGAGTATGAGA
CGGCAAAAGAACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z0F5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

96.727

100

0.967

Multiple sequence alignment