Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   ETT50_RS05080 Genome accession   NZ_CP035449
Coordinates   984616..984798 (-) Length   60 a.a.
NCBI ID   WP_029714017.1    Uniprot ID   A0A5S4TLJ0
Organism   Streptococcus pyogenes strain emm56     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 979616..989798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT50_RS05060 (ETT50_05060) lepA 979863..981695 (-) 1833 WP_002989943.1 translation elongation factor 4 -
  ETT50_RS05065 (ETT50_05065) - 981765..982062 (-) 298 Protein_920 nucleoside-diphosphate kinase -
  ETT50_RS05070 (ETT50_05070) slc2 982221..983522 (-) 1302 WP_146708729.1 LPXTG-anchored collagen-like adhesin Scl2/SclB -
  ETT50_RS05075 (ETT50_05075) - 983869..984384 (-) 516 Protein_922 elongation factor 4 -
  ETT50_RS05080 (ETT50_05080) prx 984616..984798 (-) 183 WP_029714017.1 hypothetical protein Regulator
  ETT50_RS05085 (ETT50_05085) - 984997..985206 (-) 210 WP_011054450.1 helix-turn-helix domain-containing protein -
  ETT50_RS09430 - 985360..985506 (+) 147 WP_011054449.1 hypothetical protein -
  ETT50_RS05090 (ETT50_05090) - 985647..985898 (+) 252 WP_011054448.1 hypothetical protein -
  ETT50_RS05095 (ETT50_05095) - 986162..986401 (+) 240 WP_011054447.1 hypothetical protein -
  ETT50_RS05100 (ETT50_05100) - 986459..986815 (+) 357 WP_011054446.1 hypothetical protein -
  ETT50_RS05105 (ETT50_05105) - 986931..988139 (-) 1209 WP_032465153.1 glucosaminidase domain-containing protein -
  ETT50_RS05110 (ETT50_05110) - 988250..988435 (-) 186 WP_002990010.1 holin -
  ETT50_RS05115 (ETT50_05115) - 988432..988728 (-) 297 WP_002990012.1 hypothetical protein -
  ETT50_RS05120 (ETT50_05120) - 988739..989371 (-) 633 WP_032465154.1 hypothetical protein -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6890.90 Da        Isoelectric Point: 4.1947

>NTDB_id=342193 ETT50_RS05080 WP_029714017.1 984616..984798(-) (prx) [Streptococcus pyogenes strain emm56]
MLTYDEFKQAIDNGYITADTVAIVRKNGLIFDYVLPHESVRSCEIVIEERVAEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=342193 ETT50_RS05080 WP_029714017.1 984616..984798(-) (prx) [Streptococcus pyogenes strain emm56]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACACAGTAGCGATCGTGCGTAAAAA
CGGATTGATATTTGATTATGTGTTGCCGCACGAGTCTGTGAGATCGTGTGAGATTGTGATCGAGGAGAGGGTGGCGGAGG
TGATGGTGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1

  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS8232

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

80.952

70

0.567

  prx Streptococcus pyogenes MGAS315

78.571

70

0.55


Multiple sequence alignment