Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   ETT51_RS01645 Genome accession   NZ_CP035448
Coordinates   294959..295510 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm70     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 289959..300510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT51_RS01645 (ETT51_01655) comX/sigX/comX2/sigX2 294959..295510 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  ETT51_RS01650 (ETT51_01660) - 296204..296731 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  ETT51_RS01655 (ETT51_01665) yqeH 296731..297849 (+) 1119 WP_020833261.1 ribosome biogenesis GTPase YqeH -
  ETT51_RS01660 (ETT51_01670) yhbY 297874..298182 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  ETT51_RS01665 (ETT51_01675) - 298251..298883 (+) 633 WP_014407306.1 nicotinate-nucleotide adenylyltransferase -
  ETT51_RS01670 (ETT51_01680) yqeK 298880..299473 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ETT51_RS01675 (ETT51_01685) rsfS 299497..299850 (+) 354 WP_042361543.1 ribosome silencing factor -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=342120 ETT51_RS01645 WP_010921894.1 294959..295510(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm70]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=342120 ETT51_RS01645 WP_010921894.1 294959..295510(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm70]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.