Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   ETT54_RS01415 Genome accession   NZ_CP035445
Coordinates   268353..268904 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm92     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 263353..273904
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT54_RS01415 (ETT54_01415) comX/sigX/comX2/sigX2 268353..268904 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  ETT54_RS01420 (ETT54_01420) - 269463..269990 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  ETT54_RS01425 (ETT54_01425) yqeH 269990..271108 (+) 1119 WP_015016688.1 ribosome biogenesis GTPase YqeH -
  ETT54_RS01430 (ETT54_01430) yhbY 271133..271441 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  ETT54_RS01435 (ETT54_01435) - 271510..272142 (+) 633 WP_031488555.1 nicotinate-nucleotide adenylyltransferase -
  ETT54_RS01440 (ETT54_01440) yqeK 272139..272732 (+) 594 WP_038433908.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ETT54_RS01445 (ETT54_01445) rsfS 272756..273109 (+) 354 WP_011017339.1 ribosome silencing factor -
  ETT54_RS01450 (ETT54_01450) - 273157..273900 (+) 744 WP_014407307.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=341958 ETT54_RS01415 WP_010921894.1 268353..268904(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm92]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=341958 ETT54_RS01415 WP_010921894.1 268353..268904(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm92]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.