Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   ETT55_RS01610 Genome accession   NZ_CP035444
Coordinates   292120..292671 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm90.5     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 287120..297671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT55_RS01610 (ETT55_01610) comX/sigX/comX2/sigX2 292120..292671 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  ETT55_RS01615 (ETT55_01615) - 293230..293757 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  ETT55_RS01620 (ETT55_01620) yqeH 293757..294875 (+) 1119 WP_023078962.1 ribosome biogenesis GTPase YqeH -
  ETT55_RS01625 (ETT55_01625) yhbY 294899..295207 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  ETT55_RS01630 (ETT55_01630) - 295276..295908 (+) 633 WP_011184179.1 nicotinate-nucleotide adenylyltransferase -
  ETT55_RS01635 (ETT55_01635) yqeK 295905..296498 (+) 594 WP_038433908.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ETT55_RS01640 (ETT55_01640) rsfS 296522..296875 (+) 354 WP_011017339.1 ribosome silencing factor -
  ETT55_RS01645 (ETT55_01645) - 296923..297666 (+) 744 WP_014407307.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=341904 ETT55_RS01610 WP_010921894.1 292120..292671(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm90.5]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=341904 ETT55_RS01610 WP_010921894.1 292120..292671(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm90.5]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.