Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ETT56_RS05265 Genome accession   NZ_CP035443
Coordinates   1037073..1037261 (-) Length   62 a.a.
NCBI ID   WP_063632910.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm58     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1032073..1042261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT56_RS05250 (ETT56_05250) - 1033713..1034960 (-) 1248 WP_023079234.1 tetratricopeptide repeat protein -
  ETT56_RS05255 (ETT56_05255) - 1034950..1036131 (-) 1182 WP_002990002.1 AI-2E family transporter -
  ETT56_RS05260 (ETT56_05260) - 1036189..1036665 (-) 477 WP_002984880.1 8-oxo-dGTP diphosphatase -
  ETT56_RS05265 (ETT56_05265) prx 1037073..1037261 (-) 189 WP_063632910.1 hypothetical protein Regulator
  ETT56_RS05270 (ETT56_05270) - 1037441..1037749 (+) 309 WP_063632909.1 hypothetical protein -
  ETT56_RS05275 (ETT56_05275) - 1037746..1038147 (+) 402 WP_063632908.1 hypothetical protein -
  ETT56_RS05280 (ETT56_05280) - 1038179..1038826 (+) 648 WP_063632907.1 hypothetical protein -
  ETT56_RS05285 (ETT56_05285) - 1038823..1039548 (+) 726 WP_063632906.1 hypothetical protein -
  ETT56_RS05290 (ETT56_05290) - 1039694..1040560 (-) 867 WP_011054729.1 DUF334 domain-containing protein -
  ETT56_RS05295 (ETT56_05295) - 1040548..1041072 (-) 525 WP_011017840.1 Panacea domain-containing protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7258.13 Da        Isoelectric Point: 3.9282

>NTDB_id=341866 ETT56_RS05265 WP_063632910.1 1037073..1037261(-) (prx) [Streptococcus pyogenes strain emm58]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLSHEEIRDWEVVTIERISDVMAELSESE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=341866 ETT56_RS05265 WP_063632910.1 1037073..1037261(-) (prx) [Streptococcus pyogenes strain emm58]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGTAAAAA
TGGACAGATTTTTGATTATGTGTTGTCGCATGAGGAGATAAGAGATTGGGAGGTTGTGACAATCGAGCGGATATCAGATG
TTATGGCAGAACTTTCTGAGTCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

75.862

93.548

0.71
  prx Streptococcus pyogenes MGAS315

74.576

95.161

0.71
  prx Streptococcus pyogenes MGAS315

70

96.774

0.677
  prx Streptococcus pyogenes MGAS8232

71.186

95.161

0.677
  prx Streptococcus pyogenes MGAS315

85.714

67.742

0.581
  prx Streptococcus pyogenes MGAS315

82.927

66.129

0.548
  prx Streptococcus pyogenes MGAS315

73.81

67.742

0.5

Multiple sequence alignment