Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   ETT57_RS05995 Genome accession   NZ_CP035442
Coordinates   1163321..1163503 (-) Length   60 a.a.
NCBI ID   WP_014635572.1    Uniprot ID   A0A8B6J386
Organism   Streptococcus pyogenes strain emm25     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 1163321..1197130 1163321..1163503 within 0


Gene organization within MGE regions


Location: 1163321..1197130
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT57_RS05995 (ETT57_05985) prx 1163321..1163503 (-) 183 WP_014635572.1 hypothetical protein Regulator
  ETT57_RS06000 (ETT57_05990) mf2 1163743..1164501 (+) 759 WP_111684767.1 DNase Mf2 -
  ETT57_RS06005 (ETT57_05995) speC 1164612..1165319 (+) 708 WP_002985327.1 streptococcal pyrogenic exotoxin SpeC -
  ETT57_RS06010 (ETT57_06000) - 1165388..1166605 (-) 1218 WP_014635574.1 peptidoglycan amidohydrolase family protein -
  ETT57_RS06015 (ETT57_06005) - 1166724..1166951 (-) 228 WP_003058873.1 phage holin -
  ETT57_RS06020 (ETT57_06010) - 1166948..1167220 (-) 273 WP_011017397.1 hypothetical protein -
  ETT57_RS06025 (ETT57_06015) - 1167232..1167864 (-) 633 WP_011017396.1 hypothetical protein -
  ETT57_RS06030 (ETT57_06020) - 1167867..1168295 (-) 429 WP_111684763.1 DUF1617 family protein -
  ETT57_RS06035 (ETT57_06025) - 1168307..1170091 (-) 1785 WP_136048678.1 gp58-like family protein -
  ETT57_RS06040 (ETT57_06030) hylP 1170106..1171215 (-) 1110 WP_136095883.1 hyaluronoglucosaminidase -
  ETT57_RS06045 (ETT57_06035) - 1171215..1173188 (-) 1974 WP_168388764.1 phage tail spike protein -
  ETT57_RS06050 (ETT57_06040) - 1173170..1173865 (-) 696 WP_002992579.1 hypothetical protein -
  ETT57_RS06055 (ETT57_06045) - 1173862..1176225 (-) 2364 WP_136021967.1 hypothetical protein -
  ETT57_RS06060 (ETT57_06050) - 1176225..1176596 (-) 372 WP_011054678.1 DUF5361 domain-containing protein -
  ETT57_RS06065 (ETT57_06055) - 1176611..1176874 (-) 264 WP_010922455.1 hypothetical protein -
  ETT57_RS06070 (ETT57_06060) - 1176885..1177475 (-) 591 WP_063629038.1 hypothetical protein -
  ETT57_RS06075 (ETT57_06065) - 1177491..1177826 (-) 336 WP_000573598.1 hypothetical protein -
  ETT57_RS06080 (ETT57_06070) - 1177827..1178063 (-) 237 WP_000032787.1 hypothetical protein -
  ETT57_RS06085 (ETT57_06075) - 1178056..1178394 (-) 339 WP_136021968.1 hypothetical protein -
  ETT57_RS06090 (ETT57_06080) - 1178357..1178776 (-) 420 WP_063662149.1 phage Gp19/Gp15/Gp42 family protein -
  ETT57_RS06095 (ETT57_06085) - 1178786..1178986 (-) 201 WP_010922460.1 hypothetical protein -
  ETT57_RS06100 (ETT57_06090) - 1178986..1179897 (-) 912 WP_129322662.1 phage major capsid protein -
  ETT57_RS06105 (ETT57_06095) - 1179922..1180383 (-) 462 WP_010922462.1 DUF4355 domain-containing protein -
  ETT57_RS06110 (ETT57_06100) - 1180464..1181879 (-) 1416 WP_136048677.1 terminase -
  ETT57_RS06115 (ETT57_06105) - 1181961..1182197 (-) 237 WP_011888764.1 hypothetical protein -
  ETT57_RS06120 (ETT57_06110) - 1182199..1182465 (-) 267 WP_002986828.1 hypothetical protein -
  ETT57_RS09450 - 1182458..1182610 (-) 153 WP_011054687.1 hypothetical protein -
  ETT57_RS06125 (ETT57_06115) - 1182687..1182911 (-) 225 WP_002994100.1 hypothetical protein -
  ETT57_RS06130 (ETT57_06120) - 1182917..1184410 (-) 1494 WP_011017978.1 hypothetical protein -
  ETT57_RS06135 (ETT57_06125) - 1184403..1185671 (-) 1269 WP_011017979.1 phage portal protein -
  ETT57_RS06140 (ETT57_06130) - 1185668..1186024 (-) 357 WP_002994106.1 hypothetical protein -
  ETT57_RS06145 (ETT57_06135) - 1186173..1186517 (-) 345 WP_063629033.1 HNH endonuclease signature motif containing protein -
  ETT57_RS06150 (ETT57_06140) - 1186624..1187043 (-) 420 WP_010922470.1 DUF1492 domain-containing protein -
  ETT57_RS06155 (ETT57_06145) - 1187310..1187945 (-) 636 WP_010922070.1 N-6 DNA methylase -
  ETT57_RS06160 (ETT57_06150) - 1187947..1188231 (-) 285 WP_063629032.1 hypothetical protein -
  ETT57_RS06165 (ETT57_06155) - 1188218..1188421 (-) 204 WP_063629031.1 hypothetical protein -
  ETT57_RS06170 (ETT57_06160) - 1188408..1188920 (-) 513 WP_002988366.1 hypothetical protein -
  ETT57_RS06175 (ETT57_06165) - 1188917..1189258 (-) 342 WP_011888757.1 hypothetical protein -
  ETT57_RS06180 (ETT57_06170) - 1189436..1190233 (-) 798 WP_136021975.1 PD-(D/E)XK nuclease-like domain-containing protein -
  ETT57_RS06185 (ETT57_06175) - 1190230..1191204 (-) 975 WP_038433487.1 recombinase RecT -
  ETT57_RS06190 (ETT57_06180) - 1191207..1191536 (-) 330 WP_002988359.1 hypothetical protein -
  ETT57_RS06195 (ETT57_06185) - 1191592..1191798 (-) 207 WP_002988357.1 hypothetical protein -
  ETT57_RS06200 (ETT57_06190) - 1191807..1191947 (-) 141 WP_136048676.1 hypothetical protein -
  ETT57_RS06205 (ETT57_06195) - 1191944..1192177 (-) 234 WP_010922205.1 hypothetical protein -
  ETT57_RS06210 (ETT57_06200) - 1192158..1192544 (-) 387 WP_011017564.1 DnaD domain-containing protein -
  ETT57_RS09615 (ETT57_06205) - 1192670..1192939 (-) 270 WP_011106700.1 replication protein -
  ETT57_RS06220 (ETT57_06210) - 1193033..1193218 (-) 186 WP_010922477.1 hypothetical protein -
  ETT57_RS06225 (ETT57_06215) - 1193220..1193531 (-) 312 WP_010922478.1 excisionase -
  ETT57_RS06230 (ETT57_06220) - 1193801..1194013 (-) 213 WP_010922479.1 helix-turn-helix domain-containing protein -
  ETT57_RS06235 (ETT57_06225) - 1194215..1194970 (+) 756 WP_010922480.1 XRE family transcriptional regulator -
  ETT57_RS06240 (ETT57_06230) - 1194982..1195500 (+) 519 WP_010922481.1 HIRAN domain-containing protein -
  ETT57_RS06245 (ETT57_06235) - 1195624..1196766 (+) 1143 WP_136048675.1 site-specific integrase -
  ETT57_RS06250 (ETT57_06240) - 1196855..1197130 (-) 276 WP_002983920.1 HU family DNA-binding protein -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 7067.01 Da        Isoelectric Point: 4.1079

>NTDB_id=341815 ETT57_RS05995 WP_014635572.1 1163321..1163503(-) (prx) [Streptococcus pyogenes strain emm25]
MLTYDEFKQAIDNGYITGDTVMIVRKNGQIFDYVLPNEKIRDWEVVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=341815 ETT57_RS05995 WP_014635572.1 1163321..1163503(-) (prx) [Streptococcus pyogenes strain emm25]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGACAACGGATATATCACAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCGAATGAGAAGATAAGAGATTGGGAGGTTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A8B6J386

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

90

100

0.9

  prx Streptococcus pyogenes MGAS8232

85

100

0.85

  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617

  prx Streptococcus pyogenes MGAS315

85.714

70

0.6

  prx Streptococcus pyogenes MGAS315

78.571

70

0.55


Multiple sequence alignment