Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   ETT57_RS01500 Genome accession   NZ_CP035442
Coordinates   269047..269598 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm25     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 264047..274598
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT57_RS01500 (ETT57_01500) comX/sigX/comX2/sigX2 269047..269598 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  ETT57_RS01505 (ETT57_01505) - 270157..270684 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  ETT57_RS01510 (ETT57_01510) yqeH 270684..271802 (+) 1119 WP_136048538.1 ribosome biogenesis GTPase YqeH -
  ETT57_RS01515 (ETT57_01515) yhbY 271827..272135 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  ETT57_RS01520 (ETT57_01520) - 272204..272836 (+) 633 WP_031488555.1 nicotinate-nucleotide adenylyltransferase -
  ETT57_RS01525 (ETT57_01525) yqeK 272833..273426 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ETT57_RS01530 (ETT57_01530) rsfS 273450..273803 (+) 354 WP_011017339.1 ribosome silencing factor -
  ETT57_RS01535 (ETT57_01535) - 273851..274594 (+) 744 WP_014635285.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=341797 ETT57_RS01500 WP_010921894.1 269047..269598(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm25]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=341797 ETT57_RS01500 WP_010921894.1 269047..269598(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm25]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTAAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTTCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.