Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   ETT59_RS07635 Genome accession   NZ_CP035440
Coordinates   1512000..1512551 (-) Length   183 a.a.
NCBI ID   WP_136305999.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm124     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1507000..1517551
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT59_RS07600 (ETT59_07595) - 1507004..1507747 (-) 744 WP_014407307.1 class I SAM-dependent methyltransferase -
  ETT59_RS07605 (ETT59_07600) rsfS 1507795..1508148 (-) 354 WP_015055915.1 ribosome silencing factor -
  ETT59_RS07610 (ETT59_07605) yqeK 1508172..1508765 (-) 594 WP_111705214.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ETT59_RS07615 (ETT59_07610) - 1508762..1509394 (-) 633 WP_111713935.1 nicotinate-nucleotide adenylyltransferase -
  ETT59_RS07620 (ETT59_07615) yhbY 1509463..1509771 (-) 309 WP_136075305.1 ribosome assembly RNA-binding protein YhbY -
  ETT59_RS07625 (ETT59_07620) yqeH 1509796..1510914 (-) 1119 WP_136276504.1 ribosome biogenesis GTPase YqeH -
  ETT59_RS07630 (ETT59_07625) - 1510914..1511441 (-) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  ETT59_RS07635 (ETT59_07630) comX/sigX/comX2/sigX2 1512000..1512551 (-) 552 WP_136305999.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22262.05 Da        Isoelectric Point: 9.8369

>NTDB_id=341715 ETT59_RS07635 WP_136305999.1 1512000..1512551(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm124]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
CFKGRRALFRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=341715 ETT59_RS07635 WP_136305999.1 1512000..1512551(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm124]
ATGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
TGTTTCAAGGGAAGACGTGCTCTATTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.