Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   ETT61_RS08695 Genome accession   NZ_CP035438
Coordinates   1670033..1670584 (-) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm22.8     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1665033..1675584
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT61_RS08670 (ETT61_08660) - 1666401..1667246 (+) 846 WP_136020373.1 mechanosensitive ion channel family protein -
  ETT61_RS08675 (ETT61_08665) - 1667311..1667871 (-) 561 WP_009880946.1 TIGR01440 family protein -
  ETT61_RS08680 (ETT61_08670) - 1667885..1668355 (-) 471 WP_002988139.1 ECF transporter S component -
  ETT61_RS08685 (ETT61_08675) - 1668345..1669109 (-) 765 WP_002982821.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  ETT61_RS08690 (ETT61_08680) truA 1669099..1669848 (-) 750 WP_002995162.1 tRNA pseudouridine(38-40) synthase TruA -
  ETT61_RS08695 (ETT61_08685) comX/sigX/comX2/sigX2 1670033..1670584 (-) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=341607 ETT61_RS08695 WP_010921894.1 1670033..1670584(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm22.8]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=341607 ETT61_RS08695 WP_010921894.1 1670033..1670584(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm22.8]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATTTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAGGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.