Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   ETT61_RS03505 Genome accession   NZ_CP035438
Coordinates   620754..620936 (+) Length   60 a.a.
NCBI ID   WP_136020455.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm22.8     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 585502..620936 620754..620936 within 0


Gene organization within MGE regions


Location: 585502..620936
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT61_RS03245 (ETT61_03235) - 585502..586959 (-) 1458 WP_111676611.1 recombinase family protein -
  ETT61_RS03250 (ETT61_03240) - 587089..587295 (-) 207 WP_227877800.1 hypothetical protein -
  ETT61_RS03255 (ETT61_03245) - 587302..588021 (-) 720 WP_136020203.1 XRE family transcriptional regulator -
  ETT61_RS03260 (ETT61_03250) - 588204..588410 (+) 207 WP_136020204.1 helix-turn-helix transcriptional regulator -
  ETT61_RS03265 (ETT61_03255) - 588458..588679 (+) 222 WP_136020205.1 antitoxin -
  ETT61_RS10115 - 588690..588848 (+) 159 WP_168389626.1 hypothetical protein -
  ETT61_RS10120 - 588845..589138 (-) 294 WP_136114802.1 hypothetical protein -
  ETT61_RS03270 (ETT61_03260) - 589215..589433 (+) 219 WP_168389627.1 hypothetical protein -
  ETT61_RS10125 - 589430..589588 (-) 159 WP_153276795.1 hypothetical protein -
  ETT61_RS03275 (ETT61_03265) - 589823..590008 (+) 186 WP_136020207.1 hypothetical protein -
  ETT61_RS10315 (ETT61_03270) - 590102..590371 (+) 270 WP_038433488.1 replication protein -
  ETT61_RS03285 (ETT61_03275) - 590527..590916 (+) 390 WP_136020208.1 DnaD domain-containing protein -
  ETT61_RS03290 (ETT61_03280) - 590897..591130 (+) 234 WP_002988350.1 hypothetical protein -
  ETT61_RS03295 (ETT61_03285) - 591127..591267 (+) 141 WP_011017992.1 hypothetical protein -
  ETT61_RS03300 (ETT61_03290) - 591276..591482 (+) 207 WP_011017565.1 hypothetical protein -
  ETT61_RS03305 (ETT61_03295) - 591538..591867 (+) 330 WP_063629030.1 hypothetical protein -
  ETT61_RS03310 (ETT61_03300) - 591870..592841 (+) 972 WP_136020209.1 recombinase RecT -
  ETT61_RS03315 (ETT61_03305) - 592838..593038 (+) 201 WP_000594115.1 hypothetical protein -
  ETT61_RS03320 (ETT61_03310) - 593031..593828 (+) 798 WP_002988362.1 PD-(D/E)XK nuclease-like domain-containing protein -
  ETT61_RS03325 (ETT61_03315) - 594006..594347 (+) 342 WP_011888757.1 hypothetical protein -
  ETT61_RS03330 (ETT61_03320) - 594344..594856 (+) 513 WP_032463367.1 phage protein -
  ETT61_RS10320 (ETT61_03325) - 594843..595028 (+) 186 WP_011017985.1 hypothetical protein -
  ETT61_RS03340 (ETT61_03330) - 595033..595302 (+) 270 WP_111684751.1 hypothetical protein -
  ETT61_RS03345 (ETT61_03335) - 595305..596054 (+) 750 WP_136020210.1 site-specific DNA-methyltransferase -
  ETT61_RS03350 (ETT61_03340) - 596563..596982 (+) 420 WP_021733384.1 DUF1492 domain-containing protein -
  ETT61_RS03355 (ETT61_03345) - 597093..597437 (+) 345 WP_010922469.1 HNH endonuclease signature motif containing protein -
  ETT61_RS03360 (ETT61_03350) - 597586..597942 (+) 357 WP_002994106.1 hypothetical protein -
  ETT61_RS03365 (ETT61_03355) - 597939..599207 (+) 1269 WP_136020527.1 phage portal protein -
  ETT61_RS03370 (ETT61_03360) - 599200..600693 (+) 1494 WP_011017978.1 hypothetical protein -
  ETT61_RS03375 (ETT61_03365) - 600699..600923 (+) 225 WP_002994100.1 hypothetical protein -
  ETT61_RS10130 - 601000..601152 (+) 153 WP_011054687.1 hypothetical protein -
  ETT61_RS03380 (ETT61_03370) - 601145..601411 (+) 267 WP_002986828.1 hypothetical protein -
  ETT61_RS03385 (ETT61_03375) - 601413..601649 (+) 237 WP_011888764.1 hypothetical protein -
  ETT61_RS03390 (ETT61_03380) - 601731..603146 (+) 1416 WP_136020531.1 terminase -
  ETT61_RS03395 (ETT61_03385) - 603228..603689 (+) 462 WP_010922462.1 DUF4355 domain-containing protein -
  ETT61_RS03400 (ETT61_03390) - 603714..604625 (+) 912 WP_011528788.1 phage major capsid protein -
  ETT61_RS03405 (ETT61_03395) - 604625..604825 (+) 201 WP_010922460.1 hypothetical protein -
  ETT61_RS03410 (ETT61_03400) - 604835..605257 (+) 423 WP_011054682.1 phage Gp19/Gp15/Gp42 family protein -
  ETT61_RS03415 (ETT61_03405) - 605217..605555 (+) 339 WP_011054681.1 hypothetical protein -
  ETT61_RS03420 (ETT61_03410) - 605548..605784 (+) 237 WP_000032787.1 hypothetical protein -
  ETT61_RS03425 (ETT61_03415) - 605785..606120 (+) 336 WP_011528787.1 hypothetical protein -
  ETT61_RS03430 (ETT61_03420) - 606132..606710 (+) 579 WP_011888768.1 hypothetical protein -
  ETT61_RS03435 (ETT61_03425) - 606721..606984 (+) 264 WP_010922455.1 hypothetical protein -
  ETT61_RS03440 (ETT61_03430) - 606999..607370 (+) 372 WP_011528785.1 DUF5361 domain-containing protein -
  ETT61_RS03445 (ETT61_03435) - 607370..609727 (+) 2358 WP_136020450.1 hypothetical protein -
  ETT61_RS03450 (ETT61_03440) - 609724..610419 (+) 696 WP_010922452.1 hypothetical protein -
  ETT61_RS03455 (ETT61_03445) - 610416..612368 (+) 1953 WP_136020451.1 phage tail spike protein -
  ETT61_RS03460 (ETT61_03450) - 612368..613483 (+) 1116 WP_136020452.1 hyaluronoglucosaminidase -
  ETT61_RS03465 (ETT61_03455) - 613493..615433 (+) 1941 WP_111676577.1 gp58-like family protein -
  ETT61_RS03470 (ETT61_03460) - 615442..615870 (+) 429 WP_111676575.1 DUF1617 family protein -
  ETT61_RS03475 (ETT61_03465) - 615873..616505 (+) 633 WP_136020453.1 hypothetical protein -
  ETT61_RS03480 (ETT61_03470) - 616517..616789 (+) 273 WP_011017397.1 hypothetical protein -
  ETT61_RS03485 (ETT61_03475) - 616786..617013 (+) 228 WP_003058873.1 phage holin -
  ETT61_RS03490 (ETT61_03480) - 617132..618349 (+) 1218 WP_136020454.1 peptidoglycan amidohydrolase family protein -
  ETT61_RS03495 (ETT61_03485) - 618487..619611 (+) 1125 WP_023609814.1 Fic family protein -
  ETT61_RS03500 (ETT61_03490) entC3 619859..620641 (+) 783 WP_002988472.1 enterotoxin type C3 EntC3 -
  ETT61_RS03505 (ETT61_03495) prx 620754..620936 (+) 183 WP_136020455.1 Paratox Regulator

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6930.90 Da        Isoelectric Point: 4.4797

>NTDB_id=341590 ETT61_RS03505 WP_136020455.1 620754..620936(+) (prx) [Streptococcus pyogenes strain emm22.8]
MLTYNEFKQAIDNGYITADTVMIVRKNGQIFDYVLPHEKVKNGEVVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=341590 ETT61_RS03505 WP_136020455.1 620754..620936(+) (prx) [Streptococcus pyogenes strain emm22.8]
ATGCTAACATACAACGAGTTTAAGCAAGCAATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTTTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACAGACGAAAAAGTGGAAGAGG
TGCTAGTGGAGCTTTCGAGATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

91.667

100

0.917

  prx Streptococcus pyogenes MGAS8232

90

100

0.9

  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS315

83.721

71.667

0.6

  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583

  prx Streptococcus pyogenes MGAS315

73.81

70

0.517


Multiple sequence alignment