Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   ETT61_RS01925 Genome accession   NZ_CP035438
Coordinates   344820..345371 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm22.8     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 339820..350371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT61_RS01925 (ETT61_01925) comX/sigX/comX2/sigX2 344820..345371 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  ETT61_RS01930 (ETT61_01930) - 345929..346456 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  ETT61_RS01935 (ETT61_01935) yqeH 346456..347574 (+) 1119 WP_136019962.1 ribosome biogenesis GTPase YqeH -
  ETT61_RS01940 (ETT61_01940) yhbY 347599..347907 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  ETT61_RS01945 (ETT61_01945) - 347976..348608 (+) 633 WP_111713935.1 nicotinate-nucleotide adenylyltransferase -
  ETT61_RS01950 (ETT61_01950) yqeK 348605..349198 (+) 594 WP_136019963.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ETT61_RS01955 (ETT61_01955) - 349174..349434 (+) 261 WP_011528257.1 isochorismatase family protein -
  ETT61_RS01960 (ETT61_01960) rsfS 349436..349789 (+) 354 WP_003049699.1 ribosome silencing factor -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=341579 ETT61_RS01925 WP_010921894.1 344820..345371(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm22.8]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=341579 ETT61_RS01925 WP_010921894.1 344820..345371(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm22.8]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATTTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAGGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.