Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   ETT64_RS07815 Genome accession   NZ_CP035435
Coordinates   1499729..1500280 (-) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm64.3     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1494729..1505280
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT64_RS07780 (ETT64_07775) - 1494733..1495476 (-) 744 WP_014407307.1 class I SAM-dependent methyltransferase -
  ETT64_RS07785 (ETT64_07780) rsfS 1495524..1495877 (-) 354 WP_015055915.1 ribosome silencing factor -
  ETT64_RS07790 (ETT64_07785) yqeK 1495901..1496494 (-) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ETT64_RS07795 (ETT64_07790) - 1496491..1497123 (-) 633 WP_011184179.1 nicotinate-nucleotide adenylyltransferase -
  ETT64_RS07800 (ETT64_07795) yhbY 1497192..1497500 (-) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  ETT64_RS07805 (ETT64_07800) yqeH 1497525..1498643 (-) 1119 WP_020833261.1 ribosome biogenesis GTPase YqeH -
  ETT64_RS07810 (ETT64_07805) - 1498643..1499170 (-) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  ETT64_RS07815 (ETT64_07810) comX/sigX/comX2/sigX2 1499729..1500280 (-) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=341450 ETT64_RS07815 WP_010921894.1 1499729..1500280(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm64.3]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=341450 ETT64_RS07815 WP_010921894.1 1499729..1500280(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm64.3]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.