Detailed information    

insolico Bioinformatically predicted

Overview


Name   clpP   Type   Regulator
Locus tag   ETT67_RS01820 Genome accession   NZ_CP035432
Coordinates   335497..336087 (+) Length   196 a.a.
NCBI ID   WP_002985850.1    Uniprot ID   A0A9X8T4H8
Organism   Streptococcus pyogenes strain emm11     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 330497..341087
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT67_RS01800 (ETT67_01800) - 331309..332754 (-) 1446 WP_023078954.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase -
  ETT67_RS01805 (ETT67_01805) - 332842..334476 (+) 1635 WP_136019634.1 polysaccharide biosynthesis protein -
  ETT67_RS01810 (ETT67_01810) upp 334644..335273 (+) 630 WP_002985854.1 uracil phosphoribosyltransferase -
  ETT67_RS01820 (ETT67_01820) clpP 335497..336087 (+) 591 WP_002985850.1 ATP-dependent Clp protease proteolytic subunit Regulator
  ETT67_RS01825 (ETT67_01825) - 336579..336854 (+) 276 WP_002985847.1 YlbG family protein -
  ETT67_RS01830 (ETT67_01830) tmk 337103..337738 (+) 636 WP_136019635.1 dTMP kinase -
  ETT67_RS01835 (ETT67_01835) - 337756..338631 (+) 876 WP_136019636.1 DNA polymerase III subunit delta' -
  ETT67_RS09335 - 338755..338889 (+) 135 WP_014635307.1 tpl protein -
  ETT67_RS01845 (ETT67_01845) yabA 339294..339617 (+) 324 WP_002985838.1 DNA replication initiation control protein YabA -
  ETT67_RS01850 (ETT67_01850) rsmI 339622..340485 (+) 864 WP_023078946.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ETT67_RS01855 (ETT67_01855) - 340512..340904 (+) 393 WP_023078971.1 DUF5684 domain-containing protein -

Sequence


Protein


Download         Length: 196 a.a.        Molecular weight: 21648.88 Da        Isoelectric Point: 5.2834

>NTDB_id=341264 ETT67_RS01820 WP_002985850.1 335497..336087(+) (clpP) [Streptococcus pyogenes strain emm11]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK

Nucleotide


Download         Length: 591 bp        

>NTDB_id=341264 ETT67_RS01820 WP_002985850.1 335497..336087(+) (clpP) [Streptococcus pyogenes strain emm11]
ATGATTCCTGTTGTTATTGAACAAACTAGCCGTGGAGAACGTTCTTATGACATTTATTCACGTTTATTAAAAGACCGTAT
TATCATGTTAACAGGGCCTGTCGAAGACAACATGGCCAACTCTGTCATAGCGCAGCTCTTATTCCTTGACGCGCAAGACA
ACACGAAAGATATCTACCTATATGTCAACACACCAGGTGGCTCTGTCTCAGCAGGCTTGGCTATTGTCGATACCATGAAC
TTTATCAAGGCCGATGTGCAAACTATTGTCATGGGTATGGCAGCTTCTATGGGGACAGTCATTGCTTCATCAGGAACAAA
AGGCAAACGCTTTATGTTACCAAATGCAGAGTATATGATCCACCAGCCAATGGGTGGCACAGGCGGTGGCACGCAACAAA
CGGATATGGCTATCGCAGCAGAACATCTCTTAAAAACACGTCACCGTTTAGAAAAAATCTTAGCACAAAATGCTGGAAAA
ACGATTAAACAAATTCATAAAGATGCTGAGCGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAACAACGAACTAAAATAA

Domains


Predicted by InterproScan.

(11-192)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  clpP Streptococcus pyogenes MGAS315

100

100

1

  clpP Streptococcus pyogenes JRS4

100

100

1

  clpP Streptococcus mutans UA159

90.816

100

0.908

  clpP Streptococcus pneumoniae Rx1

90.769

99.49

0.903

  clpP Streptococcus pneumoniae D39

90.769

99.49

0.903

  clpP Streptococcus pneumoniae R6

90.769

99.49

0.903

  clpP Streptococcus pneumoniae TIGR4

90.769

99.49

0.903

  clpP Streptococcus thermophilus LMG 18311

89.796

100

0.898

  clpP Streptococcus thermophilus LMD-9

89.796

100

0.898

  clpP Lactococcus lactis subsp. lactis strain DGCC12653

86.224

100

0.862

  clpP Lactococcus lactis subsp. cremoris KW2

85.714

100

0.857

  clpP Bacillus subtilis subsp. subtilis str. 168

57.143

100

0.571

  clpP Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

56.995

98.469

0.561


Multiple sequence alignment