Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   ETT70_RS05275 Genome accession   NZ_CP035429
Coordinates   1006447..1006590 (-) Length   47 a.a.
NCBI ID   WP_136113944.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emmNA     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1001447..1011590
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT70_RS05250 (ETT70_05240) - 1003206..1003577 (+) 372 WP_002989617.1 GntR family transcriptional regulator -
  ETT70_RS05255 (ETT70_05245) - 1003577..1004275 (+) 699 WP_002984437.1 ABC transporter ATP-binding protein -
  ETT70_RS05260 (ETT70_05250) - 1004285..1005070 (+) 786 WP_002984433.1 hypothetical protein -
  ETT70_RS05265 (ETT70_05255) - 1005197..1005811 (-) 615 WP_002989607.1 TVP38/TMEM64 family protein -
  ETT70_RS05275 (ETT70_05265) prx 1006447..1006590 (-) 144 WP_136113944.1 Paratox Regulator
  ETT70_RS05280 (ETT70_05270) - 1007286..1008494 (-) 1209 WP_136275997.1 glucosaminidase domain-containing protein -
  ETT70_RS05285 (ETT70_05275) - 1008605..1008790 (-) 186 WP_011054731.1 holin -
  ETT70_RS05290 (ETT70_05280) - 1008787..1009083 (-) 297 WP_023078532.1 hypothetical protein -
  ETT70_RS05295 (ETT70_05285) - 1009094..1009705 (-) 612 WP_136275996.1 DUF1366 domain-containing protein -
  ETT70_RS05300 (ETT70_05290) - 1009708..1010139 (-) 432 WP_063632964.1 DUF1617 family protein -

Sequence


Protein


Download         Length: 47 a.a.        Molecular weight: 5410.24 Da        Isoelectric Point: 4.0339

>NTDB_id=341119 ETT70_RS05275 WP_136113944.1 1006447..1006590(-) (prx) [Streptococcus pyogenes strain emmNA]
MLTYDEFKQAIDDGYITGDTVMIVRKSGQIFDYVLLGEPVKPWEILT

Nucleotide


Download         Length: 144 bp        

>NTDB_id=341119 ETT70_RS05275 WP_136113944.1 1006447..1006590(-) (prx) [Streptococcus pyogenes strain emmNA]
ATGCTAACATACGACGAGTTTAAGCAAGCTATTGATGACGGATATATCACAGGAGACACGGTTATGATCGTGCGCAAGAG
CGGACAGATTTTTGATTATGTGTTGCTTGGTGAGCCTGTGAAACCGTGGGAAATTTTGACTTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

78.723

100

0.787

  prx Streptococcus pyogenes MGAS315

76.596

100

0.766

  prx Streptococcus pyogenes MGAS8232

76.596

100

0.766

  prx Streptococcus pyogenes MGAS315

83.333

89.362

0.745

  prx Streptococcus pyogenes MGAS315

82.927

87.234

0.723

  prx Streptococcus pyogenes MGAS315

73.913

97.872

0.723

  prx Streptococcus pyogenes MGAS315

70.732

87.234

0.617


Multiple sequence alignment