Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   ETT70_RS04140 Genome accession   NZ_CP035429
Coordinates   773263..773451 (+) Length   62 a.a.
NCBI ID   WP_136105726.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emmNA     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 737698..773451 773263..773451 within 0


Gene organization within MGE regions


Location: 737698..773451
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT70_RS03870 (ETT70_03860) - 737698..738291 (+) 594 WP_002990099.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  ETT70_RS03875 (ETT70_03865) rfbB 738535..739575 (+) 1041 WP_002984881.1 dTDP-glucose 4,6-dehydratase -
  ETT70_RS03880 (ETT70_03870) - 739658..740797 (-) 1140 WP_136275813.1 site-specific integrase -
  ETT70_RS03885 (ETT70_03875) - 740925..741191 (-) 267 WP_002994745.1 DUF4177 domain-containing protein -
  ETT70_RS03890 (ETT70_03880) - 741203..741583 (-) 381 WP_002994744.1 ImmA/IrrE family metallo-endopeptidase -
  ETT70_RS03895 (ETT70_03885) - 741587..741934 (-) 348 WP_002994741.1 helix-turn-helix domain-containing protein -
  ETT70_RS03900 (ETT70_03890) - 742357..742452 (-) 96 WP_020837683.1 type I toxin-antitoxin system Fst family toxin -
  ETT70_RS03905 (ETT70_03895) - 743088..743279 (+) 192 WP_002993390.1 hypothetical protein -
  ETT70_RS03910 (ETT70_03900) - 743291..744007 (+) 717 WP_002993387.1 phage antirepressor KilAC domain-containing protein -
  ETT70_RS09375 - 744020..744151 (+) 132 WP_002985401.1 hypothetical protein -
  ETT70_RS03915 (ETT70_03905) - 744148..744330 (-) 183 WP_011889039.1 hypothetical protein -
  ETT70_RS03920 (ETT70_03910) - 744437..744748 (+) 312 WP_032461154.1 hypothetical protein -
  ETT70_RS03925 (ETT70_03915) - 744750..744935 (+) 186 WP_032461153.1 hypothetical protein -
  ETT70_RS03930 (ETT70_03920) - 744993..745304 (+) 312 WP_345694368.1 helix-turn-helix domain-containing protein -
  ETT70_RS03935 (ETT70_03925) - 745405..745818 (+) 414 WP_186787907.1 DnaD domain-containing protein -
  ETT70_RS03940 (ETT70_03930) - 745799..746032 (+) 234 WP_136059307.1 hypothetical protein -
  ETT70_RS03945 (ETT70_03935) - 746029..746169 (+) 141 WP_011017992.1 hypothetical protein -
  ETT70_RS03950 (ETT70_03940) - 746178..746390 (+) 213 WP_063629413.1 hypothetical protein -
  ETT70_RS03955 (ETT70_03945) bet 746411..747256 (+) 846 WP_063629412.1 phage recombination protein Bet -
  ETT70_RS03960 (ETT70_03950) - 747266..748294 (+) 1029 WP_011888756.1 DUF1351 domain-containing protein -
  ETT70_RS03965 (ETT70_03955) - 748491..748832 (+) 342 WP_011888757.1 hypothetical protein -
  ETT70_RS03970 (ETT70_03960) - 748829..749341 (+) 513 WP_032463367.1 phage protein -
  ETT70_RS09380 (ETT70_03965) - 749328..749513 (+) 186 WP_011017985.1 hypothetical protein -
  ETT70_RS03980 (ETT70_03970) - 749518..749787 (+) 270 WP_111684751.1 hypothetical protein -
  ETT70_RS03985 (ETT70_03975) - 749790..750539 (+) 750 WP_080465051.1 site-specific DNA-methyltransferase -
  ETT70_RS03990 (ETT70_03980) - 751048..751467 (+) 420 WP_111684753.1 DUF1492 domain-containing protein -
  ETT70_RS03995 (ETT70_03985) - 751574..751918 (+) 345 WP_063629033.1 HNH endonuclease signature motif containing protein -
  ETT70_RS04000 (ETT70_03990) - 752067..752423 (+) 357 WP_032461152.1 hypothetical protein -
  ETT70_RS04005 (ETT70_03995) - 752420..753688 (+) 1269 WP_032461151.1 phage portal protein -
  ETT70_RS04010 (ETT70_04000) - 753681..755174 (+) 1494 WP_011017978.1 hypothetical protein -
  ETT70_RS04015 (ETT70_04005) - 755180..755404 (+) 225 WP_002994100.1 hypothetical protein -
  ETT70_RS04020 (ETT70_04010) - 755454..755633 (+) 180 WP_032461150.1 hypothetical protein -
  ETT70_RS04025 (ETT70_04015) - 755626..755892 (+) 267 WP_002986828.1 hypothetical protein -
  ETT70_RS04030 (ETT70_04020) - 755894..756130 (+) 237 WP_011888764.1 hypothetical protein -
  ETT70_RS04035 (ETT70_04025) - 756212..757627 (+) 1416 WP_032461148.1 terminase -
  ETT70_RS04040 (ETT70_04030) - 757698..758159 (+) 462 WP_136275814.1 DUF4355 domain-containing protein -
  ETT70_RS04045 (ETT70_04035) - 758184..759095 (+) 912 WP_063631463.1 phage major capsid protein -
  ETT70_RS04050 (ETT70_04040) - 759095..759295 (+) 201 WP_010922460.1 hypothetical protein -
  ETT70_RS04055 (ETT70_04045) - 759305..759727 (+) 423 WP_021733479.1 phage Gp19/Gp15/Gp42 family protein -
  ETT70_RS04060 (ETT70_04050) - 759687..760025 (+) 339 WP_011054681.1 hypothetical protein -
  ETT70_RS04065 (ETT70_04055) - 760018..760254 (+) 237 WP_111676592.1 hypothetical protein -
  ETT70_RS04070 (ETT70_04060) - 760255..760590 (+) 336 WP_000573598.1 hypothetical protein -
  ETT70_RS04075 (ETT70_04065) - 760602..761186 (+) 585 WP_111684757.1 phage tail protein -
  ETT70_RS04080 (ETT70_04070) - 761196..761459 (+) 264 WP_032461128.1 hypothetical protein -
  ETT70_RS04085 (ETT70_04075) - 761474..761845 (+) 372 WP_032461127.1 DUF5361 domain-containing protein -
  ETT70_RS04090 (ETT70_04080) - 761845..764202 (+) 2358 WP_136105733.1 hypothetical protein -
  ETT70_RS04095 (ETT70_04085) - 764199..764894 (+) 696 WP_111676584.1 hypothetical protein -
  ETT70_RS04100 (ETT70_04090) - 764876..766855 (+) 1980 WP_168410055.1 phage tail spike protein -
  ETT70_RS04105 (ETT70_04095) - 766855..767880 (+) 1026 WP_136105732.1 hyaluronoglucosaminidase -
  ETT70_RS04110 (ETT70_04100) - 767895..769679 (+) 1785 WP_136105731.1 gp58-like family protein -
  ETT70_RS04115 (ETT70_04105) - 769691..770119 (+) 429 WP_063629045.1 DUF1617 family protein -
  ETT70_RS04120 (ETT70_04110) - 770122..770754 (+) 633 WP_063629046.1 hypothetical protein -
  ETT70_RS04125 (ETT70_04115) - 770765..771064 (+) 300 WP_002993162.1 hypothetical protein -
  ETT70_RS04130 (ETT70_04120) - 771061..771246 (+) 186 WP_111676573.1 holin -
  ETT70_RS04135 (ETT70_04125) - 771357..772559 (+) 1203 WP_136275815.1 glucosaminidase domain-containing protein -
  ETT70_RS04140 (ETT70_04130) prx 773263..773451 (+) 189 WP_136105726.1 Paratox Regulator

Sequence


Protein


Download         Length: 62 a.a.        Molecular weight: 7238.14 Da        Isoelectric Point: 3.9282

>NTDB_id=341115 ETT70_RS04140 WP_136105726.1 773263..773451(+) (prx) [Streptococcus pyogenes strain emmNA]
MLTYDEFKQAIDNGYITADAVMIVRKNGQIFDYVLPHEEIRDWEVVTIERISDVMAELSESE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=341115 ETT70_RS04140 WP_136105726.1 773263..773451(+) (prx) [Streptococcus pyogenes strain emmNA]
ATGCTAACATACGACGAATTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACGCAGTAATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAGGAGATAAGAGATTGGGAGGTTGTGACAATCGAGCGGATATCAGATG
TTATGGCAGAACTTTCTGAGTCTGAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

75.862

93.548

0.71

  prx Streptococcus pyogenes MGAS315

74.576

95.161

0.71

  prx Streptococcus pyogenes MGAS315

70

96.774

0.677

  prx Streptococcus pyogenes MGAS8232

71.186

95.161

0.677

  prx Streptococcus pyogenes MGAS315

85.714

67.742

0.581

  prx Streptococcus pyogenes MGAS315

82.927

66.129

0.548

  prx Streptococcus pyogenes MGAS315

73.81

67.742

0.5


Multiple sequence alignment