Detailed information    

insolico Bioinformatically predicted

Overview


Name   clpP   Type   Regulator
Locus tag   ETT71_RS02080 Genome accession   NZ_CP035428
Coordinates   371315..371905 (+) Length   196 a.a.
NCBI ID   WP_002985850.1    Uniprot ID   A0A9X8T4H8
Organism   Streptococcus pyogenes strain emmSTG866.1     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 366315..376905
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT71_RS02060 (ETT71_02060) - 367127..368572 (-) 1446 WP_136093476.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase -
  ETT71_RS02065 (ETT71_02065) - 368660..370294 (+) 1635 WP_011284531.1 polysaccharide biosynthesis protein -
  ETT71_RS02070 (ETT71_02070) upp 370462..371091 (+) 630 WP_002985854.1 uracil phosphoribosyltransferase -
  ETT71_RS02080 (ETT71_02080) clpP 371315..371905 (+) 591 WP_002985850.1 ATP-dependent Clp protease proteolytic subunit Regulator
  ETT71_RS02085 (ETT71_02085) - 372399..372674 (+) 276 WP_002985847.1 YlbG family protein -
  ETT71_RS02090 (ETT71_02090) tmk 372923..373558 (+) 636 WP_010921930.1 dTMP kinase -
  ETT71_RS02095 (ETT71_02095) - 373576..374451 (+) 876 WP_038432816.1 DNA polymerase III subunit delta' -
  ETT71_RS09285 - 374470..374616 (+) 147 WP_227868520.1 hypothetical protein -
  ETT71_RS02105 (ETT71_02105) yabA 375115..375438 (+) 324 WP_002985838.1 DNA replication initiation control protein YabA -
  ETT71_RS02110 (ETT71_02110) rsmI 375443..376306 (+) 864 WP_136085438.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ETT71_RS02115 (ETT71_02115) - 376333..376725 (+) 393 WP_002985833.1 DUF5684 domain-containing protein -

Sequence


Protein


Download         Length: 196 a.a.        Molecular weight: 21648.88 Da        Isoelectric Point: 5.2834

>NTDB_id=341050 ETT71_RS02080 WP_002985850.1 371315..371905(+) (clpP) [Streptococcus pyogenes strain emmSTG866.1]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK

Nucleotide


Download         Length: 591 bp        

>NTDB_id=341050 ETT71_RS02080 WP_002985850.1 371315..371905(+) (clpP) [Streptococcus pyogenes strain emmSTG866.1]
ATGATTCCTGTTGTTATTGAACAAACTAGTCGTGGAGAACGTTCTTATGACATTTATTCACGTTTATTAAAAGACCGTAT
TATCATGTTAACAGGGCCTGTCGAAGACAACATGGCCAACTCTGTCATAGCGCAGCTCTTATTCCTTGACGCGCAAGACA
ACACTAAAGATATCTACCTATATGTCAACACACCAGGTGGCTCTGTCTCAGCAGGCTTGGCTATTGTCGATACCATGAAC
TTTATCAAGGCCGATGTGCAAACTATTGTCATGGGTATGGCAGCTTCTATGGGGACAGTCATTGCTTCATCAGGAACAAA
AGGCAAACGCTTTATGTTACCAAATGCAGAGTATATGATCCACCAGCCAATGGGTGGCACAGGCGGTGGCACGCAACAAA
CGGATATGGCTATCGCAGCAGAACATCTCTTAAAAACACGTCACCGTTTAGAAAAAATCTTAGCGCAAAATGCTGGAAAA
ACGATTAAACAAATCCATAAAGATGCTGAGCGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAACAACGAACTAAAATAA

Domains


Predicted by InterproScan.

(11-192)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  clpP Streptococcus pyogenes MGAS315

100

100

1

  clpP Streptococcus pyogenes JRS4

100

100

1

  clpP Streptococcus mutans UA159

90.816

100

0.908

  clpP Streptococcus pneumoniae Rx1

90.769

99.49

0.903

  clpP Streptococcus pneumoniae D39

90.769

99.49

0.903

  clpP Streptococcus pneumoniae R6

90.769

99.49

0.903

  clpP Streptococcus pneumoniae TIGR4

90.769

99.49

0.903

  clpP Streptococcus thermophilus LMG 18311

89.796

100

0.898

  clpP Streptococcus thermophilus LMD-9

89.796

100

0.898

  clpP Lactococcus lactis subsp. lactis strain DGCC12653

86.224

100

0.862

  clpP Lactococcus lactis subsp. cremoris KW2

85.714

100

0.857

  clpP Bacillus subtilis subsp. subtilis str. 168

57.143

100

0.571

  clpP Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

56.995

98.469

0.561


Multiple sequence alignment