Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   ETT71_RS01745 Genome accession   NZ_CP035428
Coordinates   308860..309411 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emmSTG866.1     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 303860..314411
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT71_RS01745 (ETT71_01745) comX/sigX/comX2/sigX2 308860..309411 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  ETT71_RS01750 (ETT71_01750) - 309970..310497 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  ETT71_RS01755 (ETT71_01755) yqeH 310497..311615 (+) 1119 WP_014407305.1 ribosome biogenesis GTPase YqeH -
  ETT71_RS01760 (ETT71_01760) yhbY 311640..311948 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  ETT71_RS01765 (ETT71_01765) - 312017..312649 (+) 633 WP_014407306.1 nicotinate-nucleotide adenylyltransferase -
  ETT71_RS01770 (ETT71_01770) yqeK 312646..313239 (+) 594 WP_136093464.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ETT71_RS01775 (ETT71_01775) rsfS 313263..313616 (+) 354 WP_015055915.1 ribosome silencing factor -
  ETT71_RS01780 (ETT71_01780) - 313664..314407 (+) 744 WP_014407307.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=341048 ETT71_RS01745 WP_010921894.1 308860..309411(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emmSTG866.1]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=341048 ETT71_RS01745 WP_010921894.1 308860..309411(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emmSTG866.1]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.