Detailed information NTG0340902

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ETL60_RS18030
• Genome accession: NZ_CP035414
• Coordinates: 3355450..3356043 (+)
• Length: 197 a.a.
• NCBI ID: WP_003228214.1
• Uniprot ID: A0A199WEF2
• Organism: Bacillus subtilis strain SRCM103637
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3350450..3361043

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETL60_RS18000 (ETL60_18000)	aspP	3351423..3352985 (+)	1563	WP_003228228.1	aspartate/proton symporter AspP	-
ETL60_RS18005 (ETL60_18005)	-	3353080..3353664 (+)	585	WP_046160880.1	TetR family transcriptional regulator	-
ETL60_RS18010 (ETL60_18010)	psmA	3353746..3354081 (+)	336	WP_087614721.1	multidrug efflux SMR transporter	-
ETL60_RS18015 (ETL60_18015)	psmB	3354081..3354401 (+)	321	WP_003228222.1	QacE family quaternary ammonium compound efflux SMR transporter	-
ETL60_RS18020 (ETL60_18020)	yvdQ	3354437..3354949 (-)	513	WP_014478056.1	DUF3231 family protein	-
ETL60_RS18030 (ETL60_18030)	clpP	3355450..3356043 (+)	594	WP_003228214.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
ETL60_RS18035 (ETL60_18035)	pgmB	3356087..3356761 (-)	675	WP_087614722.1	beta-phosphoglucomutase	-
ETL60_RS18040 (ETL60_18040)	malL	3356758..3358443 (-)	1686	WP_087614723.1	oligo-1,6-glucosidase	-
ETL60_RS18045 (ETL60_18045)	mdxK	3358436..3360709 (-)	2274	WP_087614724.1	maltose phosphorylase	-

Sequence

Protein

• Length: 197 a.a.
• Molecular weight: 21682.00 Da
• Isoelectric Point: 4.9416

>NTDB_id=340902 ETL60_RS18030 WP_003228214.1 3355450..3356043(+) (clpP) [Bacillus subtilis strain SRCM103637]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK

Nucleotide

• Length: 594 bp

>NTDB_id=340902 ETL60_RS18030 WP_003228214.1 3355450..3356043(+) (clpP) [Bacillus subtilis strain SRCM103637]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGTGCGCAAGGTCAAGCGA
CAGAAATTGAAATTGCCGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTTGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGACAAAAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

3D structure

• AlphaFold DB: A0A199WEF2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	100	100	1
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.617	95.431	0.655
clpP	Streptococcus thermophilus LMG 18311	58.163	99.492	0.579
clpP	Streptococcus thermophilus LMD-9	58.163	99.492	0.579
clpP	Streptococcus pneumoniae D39	57.812	97.462	0.563
clpP	Streptococcus pneumoniae Rx1	57.812	97.462	0.563
clpP	Streptococcus pneumoniae R6	57.812	97.462	0.563
clpP	Streptococcus pneumoniae TIGR4	57.812	97.462	0.563
clpP	Lactococcus lactis subsp. cremoris KW2	57.895	96.447	0.558
clpP	Streptococcus pyogenes JRS4	56.122	99.492	0.558
clpP	Streptococcus pyogenes MGAS315	56.122	99.492	0.558
clpP	Streptococcus mutans UA159	54.822	100	0.548
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.789	96.447	0.538