Detailed information
Bioinformatically predicted
Overview
| Name | comR | Type | Regulator |
| Locus tag | ESP48_RS06585 | Genome accession | NZ_CP035306 |
| Coordinates | 1217323..1218222 (+) | Length | 299 a.a. |
| NCBI ID | WP_064355637.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus strain IDCC2201 | ||
| Function | activate transcription of comX; activate transcription of comS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1212323..1223222
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ESP48_RS06565 (ESP48_06565) | trkA | 1213459..1214808 (-) | 1350 | WP_064355641.1 | Trk system potassium transporter TrkA | - |
| ESP48_RS06570 (ESP48_06570) | - | 1215097..1215606 (+) | 510 | WP_064355639.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| ESP48_RS06575 (ESP48_06575) | - | 1215918..1216475 (+) | 558 | WP_002949523.1 | ECF transporter S component | - |
| ESP48_RS06580 (ESP48_06580) | - | 1216478..1217128 (+) | 651 | WP_011226853.1 | phosphatase PAP2 family protein | - |
| ESP48_RS06585 (ESP48_06585) | comR | 1217323..1218222 (+) | 900 | WP_064355637.1 | helix-turn-helix domain-containing protein | Regulator |
| ESP48_RS09855 | - | 1218460..1219041 (+) | 582 | Protein_1210 | cysteine peptidase family C39 domain-containing protein | - |
| ESP48_RS09860 | comA | 1219026..1219316 (+) | 291 | WP_194238295.1 | ABC transporter transmembrane domain-containing protein | Regulator |
| ESP48_RS10200 (ESP48_06600) | comA | 1219659..1219868 (+) | 210 | WP_002946147.1 | hypothetical protein | Regulator |
| ESP48_RS06610 (ESP48_06610) | - | 1219923..1220491 (+) | 569 | Protein_1213 | ATP-binding cassette domain-containing protein | - |
| ESP48_RS06615 (ESP48_06615) | - | 1220599..1220916 (+) | 318 | WP_011225454.1 | DUF805 domain-containing protein | - |
| ESP48_RS10205 | - | 1220879..1221163 (-) | 285 | WP_014727318.1 | hypothetical protein | - |
| ESP48_RS10210 | - | 1221403..1222299 (-) | 897 | WP_224102957.1 | urease cluster protein | - |
| ESP48_RS06625 (ESP48_06625) | - | 1222704..1223219 (+) | 516 | WP_002949547.1 | AmiS/UreI family transporter | - |
Sequence
Protein
Download Length: 299 a.a. Molecular weight: 35323.71 Da Isoelectric Point: 5.0061
>NTDB_id=339190 ESP48_RS06585 WP_064355637.1 1217323..1218222(+) (comR) [Streptococcus thermophilus strain IDCC2201]
MNIKDSIGLRIKTERERQQMSREVLCLDGAELTVRQLIRIEKGESLPSLDRLSYIAKRLGKSMTELLDQDNITIPDEYYE
MKNRLIKFPTYRNPDRIKSKLTLIEEVYEKFFDILPEEELLTLDILENILSFTSWEESPKVEEIYEDLFEQVKRKRKFST
NDLLVIDYYFFHLYGRKQYDKKLFERIIKRVLNQEIWTDDVYNIVLFNDFMAIAALKIFHNSFSDFLTVVDKALAVIENS
QLYSYKPSVFVLKAKYELLHKENKKEAAENYDKAIMFASVLEDSVLEESIKAGKLADGL
MNIKDSIGLRIKTERERQQMSREVLCLDGAELTVRQLIRIEKGESLPSLDRLSYIAKRLGKSMTELLDQDNITIPDEYYE
MKNRLIKFPTYRNPDRIKSKLTLIEEVYEKFFDILPEEELLTLDILENILSFTSWEESPKVEEIYEDLFEQVKRKRKFST
NDLLVIDYYFFHLYGRKQYDKKLFERIIKRVLNQEIWTDDVYNIVLFNDFMAIAALKIFHNSFSDFLTVVDKALAVIENS
QLYSYKPSVFVLKAKYELLHKENKKEAAENYDKAIMFASVLEDSVLEESIKAGKLADGL
Nucleotide
Download Length: 900 bp
>NTDB_id=339190 ESP48_RS06585 WP_064355637.1 1217323..1218222(+) (comR) [Streptococcus thermophilus strain IDCC2201]
TTGAACATAAAAGACAGCATTGGACTAAGAATCAAAACTGAGCGTGAACGCCAACAGATGTCACGTGAAGTGCTATGTTT
AGATGGTGCGGAATTGACTGTTCGCCAGTTAATTCGTATTGAAAAGGGGGAGTCTCTCCCGTCTTTAGATAGATTATCGT
ATATTGCTAAACGTTTAGGAAAAAGTATGACAGAGTTATTGGATCAAGACAATATTACCATTCCTGACGAATATTATGAA
ATGAAGAATCGTTTGATTAAGTTTCCAACGTACAGAAACCCTGACAGAATAAAGTCTAAACTTACTTTGATTGAGGAAGT
CTATGAGAAATTTTTTGATATTCTTCCAGAAGAAGAATTATTAACTCTAGACATTCTCGAAAATATATTGAGTTTTACTA
GCTGGGAGGAGAGTCCAAAAGTTGAGGAGATATATGAAGACTTGTTTGAACAAGTCAAAAGGAAGAGGAAATTCTCAACT
AACGATTTATTAGTCATTGACTATTATTTCTTTCATCTTTATGGGAGAAAACAGTATGACAAAAAACTATTTGAAAGAAT
TATAAAGAGAGTATTAAATCAGGAAATTTGGACAGATGATGTTTACAATATTGTTTTATTTAATGATTTTATGGCTATTG
CTGCTTTAAAGATTTTTCACAATTCCTTCTCAGACTTCTTAACAGTTGTGGATAAAGCCTTAGCTGTCATAGAAAACTCA
CAATTATATAGCTACAAGCCTAGTGTTTTTGTACTTAAGGCTAAATATGAACTTCTGCATAAAGAAAACAAGAAAGAGGC
TGCAGAGAATTATGATAAGGCCATAATGTTTGCTTCCGTTTTGGAAGACTCGGTTTTAGAGGAAAGTATAAAGGCAGGAA
AATTGGCAGATGGTTTATAG
TTGAACATAAAAGACAGCATTGGACTAAGAATCAAAACTGAGCGTGAACGCCAACAGATGTCACGTGAAGTGCTATGTTT
AGATGGTGCGGAATTGACTGTTCGCCAGTTAATTCGTATTGAAAAGGGGGAGTCTCTCCCGTCTTTAGATAGATTATCGT
ATATTGCTAAACGTTTAGGAAAAAGTATGACAGAGTTATTGGATCAAGACAATATTACCATTCCTGACGAATATTATGAA
ATGAAGAATCGTTTGATTAAGTTTCCAACGTACAGAAACCCTGACAGAATAAAGTCTAAACTTACTTTGATTGAGGAAGT
CTATGAGAAATTTTTTGATATTCTTCCAGAAGAAGAATTATTAACTCTAGACATTCTCGAAAATATATTGAGTTTTACTA
GCTGGGAGGAGAGTCCAAAAGTTGAGGAGATATATGAAGACTTGTTTGAACAAGTCAAAAGGAAGAGGAAATTCTCAACT
AACGATTTATTAGTCATTGACTATTATTTCTTTCATCTTTATGGGAGAAAACAGTATGACAAAAAACTATTTGAAAGAAT
TATAAAGAGAGTATTAAATCAGGAAATTTGGACAGATGATGTTTACAATATTGTTTTATTTAATGATTTTATGGCTATTG
CTGCTTTAAAGATTTTTCACAATTCCTTCTCAGACTTCTTAACAGTTGTGGATAAAGCCTTAGCTGTCATAGAAAACTCA
CAATTATATAGCTACAAGCCTAGTGTTTTTGTACTTAAGGCTAAATATGAACTTCTGCATAAAGAAAACAAGAAAGAGGC
TGCAGAGAATTATGATAAGGCCATAATGTTTGCTTCCGTTTTGGAAGACTCGGTTTTAGAGGAAAGTATAAAGGCAGGAA
AATTGGCAGATGGTTTATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comR | Streptococcus thermophilus LMG 18311 |
99.331 |
100 |
0.993 |
| comR | Streptococcus thermophilus LMD-9 |
98.662 |
100 |
0.987 |
| comR | Streptococcus salivarius strain HSISS4 |
94.649 |
100 |
0.946 |
| comR | Streptococcus salivarius SK126 |
93.98 |
100 |
0.94 |
| comR/comR2 | Streptococcus sobrinus strain NIDR 6715-7 |
42.14 |
100 |
0.421 |
| comR/comR1 | Streptococcus sobrinus strain NIDR 6715-7 |
41.806 |
100 |
0.418 |