Detailed information NTG0338666

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: EQH16_RS11180
• Genome accession: NZ_CP035264
• Coordinates: 540087..540674 (-)
• Length: 195 a.a.
• NCBI ID: WP_001855030.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901921
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 535087..545674

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH16_RS02845 (EQH16_02965)	-	535551..536891 (+)	1341	WP_001017622.1	sensor histidine kinase	-
EQH16_RS02850 (EQH16_02970)	blpC	536933..537088 (-)	156	WP_000358817.1	quorum-sensing system pheromone BlpC	-
EQH16_RS02855 (EQH16_02975)	-	537145..538506 (-)	1362	Protein_565	bacteriocin secretion accessory protein	-
EQH16_RS02860 (EQH16_02980)	comA/nlmT	538517..540193 (-)	1677	WP_306423909.1	peptide cleavage/export ABC transporter	Regulator
EQH16_RS11180	comA/nlmT	540087..540674 (-)	588	WP_001855030.1	cysteine peptidase family C39 domain-containing protein	Regulator
EQH16_RS02865 (EQH16_02985)	-	540964..541167 (+)	204	WP_001093272.1	bacteriocin class II family protein	-
EQH16_RS02870 (EQH16_02990)	-	541485..541688 (+)	204	WP_000411016.1	hypothetical protein	-
EQH16_RS11085 (EQH16_03000)	-	542691..543490 (+)	800	Protein_570	IS5 family transposase	-
EQH16_RS02885 (EQH16_03005)	blpM	543643..543897 (+)	255	WP_000379877.1	two-peptide bacteriocin subunit BlpM	-
EQH16_RS02890 (EQH16_03010)	blpN	543913..544116 (+)	204	WP_001099492.1	two-peptide bacteriocin subunit BlpN	-
EQH16_RS02895 (EQH16_03020)	-	544360..544593 (+)	234	WP_000379963.1	hypothetical protein	-
EQH16_RS02900 (EQH16_03025)	-	544625..545314 (+)	690	WP_000760523.1	CPBP family intramembrane glutamic endopeptidase	-
EQH16_RS02905 (EQH16_03030)	blpZ	545356..545589 (+)	234	WP_000276498.1	immunity protein BlpZ	-

Sequence

Protein

• Length: 195 a.a.
• Molecular weight: 22286.71 Da
• Isoelectric Point: 9.6188

>NTDB_id=338666 EQH16_RS11180 WP_001855030.1 540087..540674(-) (comA/nlmT) [Streptococcus pneumoniae strain TVO_1901921]
MTSYKRTFVPQIDARDCGVASLASIAKFYGSDFSLAHLRELAKTNKEGTTALGIVKAADEMGFETRPVQADKTLFDMSDV
PYPFIVHVNKEGKLQHYYVVYQTKKDYLIIGDPDPSVKITKMSKERFFYEWTGVAIFLATKPSYQPHKDKKNGLLSKLPS
SDFQTKISHCLHCSLKLIGHYYQYRWFLLSPRNLG

Nucleotide

• Length: 588 bp

>NTDB_id=338666 EQH16_RS11180 WP_001855030.1 540087..540674(-) (comA/nlmT) [Streptococcus pneumoniae strain TVO_1901921]
ATGACTTCTTATAAACGTACATTTGTTCCTCAAATAGATGCGAGAGACTGTGGTGTCGCTTCCTTAGCCTCGATTGCTAA
ATTCTATGGTTCAGATTTTTCTCTAGCTCACTTGAGAGAACTTGCAAAGACCAATAAAGAAGGGACGACTGCTCTTGGCA
TTGTAAAAGCCGCTGATGAAATGGGCTTTGAAACAAGACCTGTTCAAGCAGATAAAACGCTCTTTGACATGAGTGATGTC
CCCTATCCATTTATCGTTCACGTTAACAAAGAAGGAAAACTCCAACATTACTATGTTGTCTATCAAACAAAGAAAGACTA
TCTGATTATTGGTGATCCTGACCCTTCTGTAAAAATCACTAAAATGTCAAAAGAACGCTTTTTCTATGAATGGACTGGAG
TAGCTATTTTTCTAGCTACCAAACCCAGCTATCAACCCCATAAAGATAAAAAGAATGGTCTACTAAGCAAGCTTCCTTCC
TCTGATTTTCAAACAAAAATCTCTCATTGCTTACATTGTTCTCTCAAGCTTATTGGTCACTATTATCAATATAGGTGGTT
CTTACTATCTCCAAGGAATCTTGGATGA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (7-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	59.89	93.333	0.559
comA	Streptococcus mitis NCTC 12261	55.435	94.359	0.523
comA	Streptococcus mitis SK321	54.891	94.359	0.518
comA	Streptococcus pneumoniae TIGR4	54.348	94.359	0.513
comA	Streptococcus pneumoniae Rx1	54.348	94.359	0.513
comA	Streptococcus pneumoniae D39	54.348	94.359	0.513
comA	Streptococcus pneumoniae R6	54.348	94.359	0.513
comA	Streptococcus gordonii str. Challis substr. CH1	52.174	94.359	0.492