Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | EQH18_RS08870 | Genome accession | NZ_CP035262 |
| Coordinates | 1781519..1781914 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain TVO_1901923 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1776519..1786914
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH18_RS08845 (EQH18_09345) | - | 1776742..1777275 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| EQH18_RS08850 (EQH18_09355) | - | 1777632..1777838 (-) | 207 | WP_000775827.1 | transcriptional regulator | - |
| EQH18_RS08855 (EQH18_09360) | - | 1777998..1779227 (+) | 1230 | WP_000436406.1 | ISL3 family transposase | - |
| EQH18_RS08860 (EQH18_09365) | groL | 1779327..1780949 (-) | 1623 | WP_000031585.1 | chaperonin GroEL | - |
| EQH18_RS08865 (EQH18_09370) | groES | 1780965..1781249 (-) | 285 | WP_061750849.1 | co-chaperone GroES | - |
| EQH18_RS08870 (EQH18_09375) | ssbB/cilA | 1781519..1781914 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| EQH18_RS08875 (EQH18_09380) | - | 1781991..1782752 (-) | 762 | WP_001107755.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| EQH18_RS08880 (EQH18_09385) | ytpR | 1782785..1783411 (-) | 627 | WP_000578309.1 | YtpR family tRNA-binding protein | - |
| EQH18_RS08885 (EQH18_09390) | - | 1783427..1783744 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| EQH18_RS08890 (EQH18_09395) | - | 1783741..1784040 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| EQH18_RS10710 | - | 1784134..1784265 (+) | 132 | WP_001811306.1 | hypothetical protein | - |
| EQH18_RS08895 | - | 1784290..1784352 (-) | 63 | WP_219300018.1 | hypothetical protein | - |
| EQH18_RS08900 (EQH18_09400) | - | 1784377..1784568 (-) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| EQH18_RS08905 (EQH18_09405) | - | 1784729..1785403 (-) | 675 | WP_000725742.1 | LiaF transmembrane domain-containing protein | - |
| EQH18_RS08910 (EQH18_09410) | - | 1785409..1785855 (-) | 447 | WP_000776587.1 | LytTR family DNA-binding domain-containing protein | - |
| EQH18_RS08915 (EQH18_09415) | - | 1785969..1786472 (-) | 504 | WP_000800947.1 | phosphatase PAP2 family protein | - |
| EQH18_RS08920 (EQH18_09420) | - | 1786469..1786831 (-) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=338478 EQH18_RS08870 WP_000282467.1 1781519..1781914(-) (ssbB/cilA) [Streptococcus pneumoniae strain TVO_1901923]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=338478 EQH18_RS08870 WP_000282467.1 1781519..1781914(-) (ssbB/cilA) [Streptococcus pneumoniae strain TVO_1901923]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |