Detailed information
Bioinformatically predicted
Overview
| Name | comA/nlmT | Type | Regulator |
| Locus tag | EQH21_RS10700 | Genome accession | NZ_CP035259 |
| Coordinates | 481526..482437 (-) | Length | 303 a.a. |
| NCBI ID | WP_001828567.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain TVO_1901926 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 476526..487437
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH21_RS02445 (EQH21_02580) | - | 476858..477187 (-) | 330 | WP_000132575.1 | hypothetical protein | - |
| EQH21_RS02450 (EQH21_02585) | - | 477463..477801 (+) | 339 | WP_000682120.1 | LytTR family DNA-binding domain-containing protein | - |
| EQH21_RS02455 (EQH21_02590) | comE/blpR | 477806..478543 (+) | 738 | WP_001219121.1 | response regulator transcription factor | Regulator |
| EQH21_RS02460 (EQH21_02595) | - | 478557..479897 (+) | 1341 | WP_001028653.1 | sensor histidine kinase | - |
| EQH21_RS02465 (EQH21_02600) | blpC | 479942..480097 (-) | 156 | WP_000358810.1 | quorum-sensing system pheromone BlpC | - |
| EQH21_RS02470 (EQH21_02605) | - | 480154..481515 (-) | 1362 | WP_001069085.1 | bacteriocin secretion accessory protein | - |
| EQH21_RS10700 | comA/nlmT | 481526..482437 (-) | 912 | WP_001828567.1 | ATP-binding cassette domain-containing protein | Regulator |
| EQH21_RS10705 | blpA | 482426..483150 (-) | 725 | Protein_495 | peptide cleavage/export ABC transporter BlpA | - |
| EQH21_RS10710 (EQH21_02615) | comA/nlmT | 483095..483682 (-) | 588 | WP_001810858.1 | cysteine peptidase family C39 domain-containing protein | Regulator |
| EQH21_RS02480 (EQH21_02620) | blpI | 483964..484161 (+) | 198 | WP_001093259.1 | bacteriocin-like peptide BlpI | - |
| EQH21_RS02485 (EQH21_02630) | blpJ | 484628..484897 (+) | 270 | WP_001093248.1 | bacteriocin-like peptide BlpJ | - |
| EQH21_RS02490 (EQH21_02635) | blpU | 484966..485196 (+) | 231 | WP_000379964.1 | bacteriocin-like peptide BlpU | - |
| EQH21_RS02495 (EQH21_02640) | - | 485199..485318 (+) | 120 | WP_000346298.1 | PncF family bacteriocin immunity protein | - |
| EQH21_RS02500 (EQH21_02650) | - | 485838..486156 (+) | 319 | Protein_501 | immunity protein | - |
| EQH21_RS02505 (EQH21_02655) | - | 486239..486622 (+) | 384 | WP_000877381.1 | hypothetical protein | - |
| EQH21_RS02510 (EQH21_02660) | - | 486674..487363 (+) | 690 | WP_000760515.1 | CPBP family intramembrane glutamic endopeptidase | - |
Sequence
Protein
Download Length: 303 a.a. Molecular weight: 34066.15 Da Isoelectric Point: 7.0330
>NTDB_id=338277 EQH21_RS10700 WP_001828567.1 481526..482437(-) (comA/nlmT) [Streptococcus pneumoniae strain TVO_1901926]
MSSKISIGQLITFNTLFSYFTTPMENIINLQTKLQSAKVANNRLNEVYLVESEFQVQENPVHSHFLMGDIEFDDLSYKYG
FGRDTLTDINLTIKQGDKVSLVGVSGSGKTTLAKMIVNFFEPYKGHISINHQDIKNIDKKVLRRHINYLPQQAYIFNGSI
LENLTLGGNHMISQEDILKACELAEIRQDIERMPMGYQTQLSDGAGLSGGQKQRIALARALLTKAPVLILDEATSGLDVL
TEKKVIDNLISLTDKTILFVAHRLSIAERTNRVIVLDQGKIIEVGSHQELMQAQGFYHHLFNK
MSSKISIGQLITFNTLFSYFTTPMENIINLQTKLQSAKVANNRLNEVYLVESEFQVQENPVHSHFLMGDIEFDDLSYKYG
FGRDTLTDINLTIKQGDKVSLVGVSGSGKTTLAKMIVNFFEPYKGHISINHQDIKNIDKKVLRRHINYLPQQAYIFNGSI
LENLTLGGNHMISQEDILKACELAEIRQDIERMPMGYQTQLSDGAGLSGGQKQRIALARALLTKAPVLILDEATSGLDVL
TEKKVIDNLISLTDKTILFVAHRLSIAERTNRVIVLDQGKIIEVGSHQELMQAQGFYHHLFNK
Nucleotide
Download Length: 912 bp
>NTDB_id=338277 EQH21_RS10700 WP_001828567.1 481526..482437(-) (comA/nlmT) [Streptococcus pneumoniae strain TVO_1901926]
ATGTCAAGTAAAATTTCTATCGGTCAGCTGATTACCTTTAACACACTTTTTTCTTACTTTACAACTCCTATGGAAAATAT
TATCAACCTCCAAACCAAACTCCAATCTGCGAAGGTCGCTAATAACCGTTTGAACGAAGTCTATCTAGTCGAATCTGAAT
TTCAAGTTCAAGAAAACCCTGTTCATTCACATTTTTTGATGGGCGATATTGAATTTGATGACCTTTCTTATAAGTATGGT
TTTGGACGAGATACCTTAACAGATATTAATCTCACGATTAAACAAGGAGATAAGGTTAGCCTAGTTGGAGTTAGTGGTTC
TGGTAAAACAACTTTAGCCAAAATGATTGTCAATTTCTTTGAACCCTACAAAGGGCATATTTCCATCAATCATCAGGATA
TTAAAAACATTGATAAAAAAGTCTTGCGCCGTCATATTAATTACCTACCCCAACAAGCCTATATCTTTAATGGCTCTATT
TTGGAAAACTTAACCTTGGGCGGTAATCATATGATTAGCCAAGAAGATATTCTAAAAGCTTGTGAATTAGCTGAAATTCG
TCAAGACATTGAAAGAATGCCTATGGGCTATCAAACTCAGCTCTCTGATGGAGCTGGTCTATCAGGAGGACAAAAGCAAC
GAATCGCTCTCGCTCGTGCTCTTTTAACTAAAGCTCCTGTTTTAATACTAGATGAAGCTACTAGCGGTCTTGATGTCTTG
ACTGAGAAAAAGGTTATAGATAATCTTATATCCCTAACTGATAAAACCATTCTCTTTGTAGCCCATCGTCTCAGTATAGC
CGAACGAACTAACCGTGTCATTGTTCTTGACCAGGGGAAAATCATTGAAGTTGGTAGTCACCAAGAGTTAATGCAAGCGC
AAGGATTCTACCATCATCTATTCAATAAATAA
ATGTCAAGTAAAATTTCTATCGGTCAGCTGATTACCTTTAACACACTTTTTTCTTACTTTACAACTCCTATGGAAAATAT
TATCAACCTCCAAACCAAACTCCAATCTGCGAAGGTCGCTAATAACCGTTTGAACGAAGTCTATCTAGTCGAATCTGAAT
TTCAAGTTCAAGAAAACCCTGTTCATTCACATTTTTTGATGGGCGATATTGAATTTGATGACCTTTCTTATAAGTATGGT
TTTGGACGAGATACCTTAACAGATATTAATCTCACGATTAAACAAGGAGATAAGGTTAGCCTAGTTGGAGTTAGTGGTTC
TGGTAAAACAACTTTAGCCAAAATGATTGTCAATTTCTTTGAACCCTACAAAGGGCATATTTCCATCAATCATCAGGATA
TTAAAAACATTGATAAAAAAGTCTTGCGCCGTCATATTAATTACCTACCCCAACAAGCCTATATCTTTAATGGCTCTATT
TTGGAAAACTTAACCTTGGGCGGTAATCATATGATTAGCCAAGAAGATATTCTAAAAGCTTGTGAATTAGCTGAAATTCG
TCAAGACATTGAAAGAATGCCTATGGGCTATCAAACTCAGCTCTCTGATGGAGCTGGTCTATCAGGAGGACAAAAGCAAC
GAATCGCTCTCGCTCGTGCTCTTTTAACTAAAGCTCCTGTTTTAATACTAGATGAAGCTACTAGCGGTCTTGATGTCTTG
ACTGAGAAAAAGGTTATAGATAATCTTATATCCCTAACTGATAAAACCATTCTCTTTGTAGCCCATCGTCTCAGTATAGC
CGAACGAACTAACCGTGTCATTGTTCTTGACCAGGGGAAAATCATTGAAGTTGGTAGTCACCAAGAGTTAATGCAAGCGC
AAGGATTCTACCATCATCTATTCAATAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA/nlmT | Streptococcus mutans UA159 |
71.854 |
99.67 |
0.716 |
| comA | Streptococcus pneumoniae Rx1 |
66.337 |
100 |
0.663 |
| comA | Streptococcus pneumoniae D39 |
66.337 |
100 |
0.663 |
| comA | Streptococcus pneumoniae R6 |
66.337 |
100 |
0.663 |
| comA | Streptococcus mitis NCTC 12261 |
66.337 |
100 |
0.663 |
| comA | Streptococcus pneumoniae TIGR4 |
66.007 |
100 |
0.66 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
65.789 |
100 |
0.66 |
| comA | Streptococcus mitis SK321 |
65.347 |
100 |
0.653 |