Detailed information NTG0338108

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: EQH23_RS10005
• Genome accession: NZ_CP035257
• Coordinates: 1953571..1954005 (-)
• Length: 144 a.a.
• NCBI ID: WP_033606693.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901928
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1948571..1959005

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH23_RS09970 (EQH23_10570)	rnpA	1948988..1949359 (-)	372	WP_000739246.1	ribonuclease P protein component	-
EQH23_RS11110	-	1949376..1949507 (-)	132	WP_000768904.1	hypothetical protein	-
EQH23_RS09975 (EQH23_10575)	-	1949508..1950698 (-)	1191	WP_000167765.1	acetate kinase	-
EQH23_RS09980 (EQH23_10580)	comYH	1950749..1951702 (-)	954	WP_000345126.1	class I SAM-dependent methyltransferase	Machinery gene
EQH23_RS09985 (EQH23_10585)	-	1951763..1952355 (-)	593	Protein_1966	class I SAM-dependent methyltransferase	-
EQH23_RS09990 (EQH23_10590)	comGG/cglG	1952458..1952904 (-)	447	WP_001809944.1	competence type IV pilus minor pilin ComGG	Machinery gene
EQH23_RS09995 (EQH23_10595)	comGF/cglF	1952882..1953343 (-)	462	WP_000250531.1	competence type IV pilus minor pilin ComGF	Machinery gene
EQH23_RS10000 (EQH23_10600)	comGE/cglE	1953306..1953608 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
EQH23_RS10005 (EQH23_10605)	comGD/cglD	1953571..1954005 (-)	435	WP_033606693.1	competence type IV pilus minor pilin ComGD	Machinery gene
EQH23_RS10010 (EQH23_10610)	comGC/cglC	1953968..1954291 (-)	324	WP_000738628.1	comG operon protein ComGC	Machinery gene
EQH23_RS10015 (EQH23_10615)	comGB/cglB	1954293..1955309 (-)	1017	WP_078130737.1	competence type IV pilus assembly protein ComGB	Machinery gene
EQH23_RS10020 (EQH23_10620)	comGA/cglA/cilD	1955257..1956198 (-)	942	WP_000249536.1	competence type IV pilus ATPase ComGA	Machinery gene
EQH23_RS10025 (EQH23_10625)	-	1956274..1956639 (-)	366	WP_000286415.1	DUF1033 family protein	-
EQH23_RS10030 (EQH23_10630)	-	1956790..1957848 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15802.39 Da
• Isoelectric Point: 10.5150

>NTDB_id=338108 EQH23_RS10005 WP_033606693.1 1953571..1954005(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1901928]
MINKILVKSLKIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQM
ISNGSQKLPVPKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=338108 EQH23_RS10005 WP_033606693.1 1953571..1954005(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1901928]
ATGATAAACAAAATACTAGTCAAATCGTTAAAGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGT
GAGTATCCTTGCCTTGGGCTTGTCCGGCTCTGTCCAGTCCACTTTTGCAGCGGTAGAGGAACAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACCCAAAAACGCAGTGTAGCTAGTCAACAAAAGACTAGTCTGAACTTGGATGGGCAGATG
ATTAGCAATGGCAGTCAAAAGTTGCCAGTCCCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGTGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	94.444	100	0.944
comGD/cglD	Streptococcus pneumoniae Rx1	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae D39	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae R6	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae TIGR4	97.744	92.361	0.903
comGD/cglD	Streptococcus mitis SK321	96.241	92.361	0.889
comYD	Streptococcus gordonii str. Challis substr. CH1	56.835	96.528	0.549
comYD	Streptococcus mutans UA140	49.612	89.583	0.444
comYD	Streptococcus mutans UA159	49.612	89.583	0.444