Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   FY406_RS10050 Genome accession   NZ_CP043405
Coordinates   2031069..2031548 (-) Length   159 a.a.
NCBI ID   WP_003088782.1    Uniprot ID   A0ABN0GUM5
Organism   Streptococcus ratti strain ATCC 31377     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2026069..2036548
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FY406_RS10030 (FY406_10030) budA 2026075..2026791 (-) 717 WP_003088774.1 acetolactate decarboxylase -
  FY406_RS10035 (FY406_10035) alsS 2026806..2028485 (-) 1680 WP_003088776.1 acetolactate synthase AlsS -
  FY406_RS10040 (FY406_10040) - 2028618..2029847 (-) 1230 WP_003088778.1 tetratricopeptide repeat protein -
  FY406_RS10045 (FY406_10045) - 2029834..2031006 (-) 1173 WP_003088780.1 AI-2E family transporter -
  FY406_RS10050 (FY406_10050) mutX 2031069..2031548 (-) 480 WP_003088782.1 8-oxo-dGTP diphosphatase Machinery gene
  FY406_RS10055 (FY406_10055) - 2031632..2032036 (+) 405 WP_003088784.1 beta-propeller fold lactonase family protein -
  FY406_RS10060 (FY406_10060) - 2032041..2032856 (+) 816 WP_003088787.1 sugar phosphate isomerase/epimerase -
  FY406_RS10065 (FY406_10065) - 2032920..2033114 (+) 195 WP_003088790.1 hypothetical protein -
  FY406_RS10070 (FY406_10070) rfbB 2033232..2034278 (-) 1047 WP_150881036.1 dTDP-glucose 4,6-dehydratase -
  FY406_RS10075 (FY406_10075) - 2034643..2035128 (-) 486 Protein_1936 phosphoribosylanthranilate isomerase -
  FY406_RS10080 (FY406_10080) - 2035128..2035721 (-) 594 WP_003088797.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18841.40 Da        Isoelectric Point: 4.9644

>NTDB_id=336894 FY406_RS10050 WP_003088782.1 2031069..2031548(-) (mutX) [Streptococcus ratti strain ATCC 31377]
MTKLATICYIDNGRELLLLHRNKKENDVHEGKWISVGGKIERGESPDECARREIFEETHLKVKKMDFKGVITFPDFTPGH
DWYTYVFKVTDFEGELISDEESREGTLAWVPYDQVLQKPTWEGDYEIFKWILEDVPFFSAKFTYVQKKLIDKQVTFYDK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=336894 FY406_RS10050 WP_003088782.1 2031069..2031548(-) (mutX) [Streptococcus ratti strain ATCC 31377]
ATGACAAAGTTAGCAACGATTTGTTATATTGATAACGGACGTGAATTGCTGCTCTTGCATCGAAATAAAAAAGAAAATGA
TGTTCATGAGGGTAAGTGGATCAGTGTCGGCGGCAAAATAGAAAGAGGAGAAAGTCCCGATGAGTGTGCGCGTCGGGAAA
TTTTTGAAGAAACCCATTTAAAGGTCAAAAAGATGGACTTCAAAGGAGTAATTACCTTTCCTGACTTTACGCCGGGACAC
GACTGGTACACTTATGTGTTTAAGGTAACTGATTTTGAAGGTGAGCTTATTTCAGATGAGGAAAGCCGTGAGGGGACTCT
TGCTTGGGTTCCTTATGATCAGGTACTTCAAAAGCCGACATGGGAAGGGGACTATGAAATTTTTAAATGGATTTTGGAAG
ATGTTCCTTTTTTCTCAGCCAAATTTACCTATGTTCAGAAAAAATTGATTGATAAACAAGTGACGTTTTATGACAAATAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

70.253

99.371

0.698

Multiple sequence alignment