Detailed information NTG0336623

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: EQH46_RS09720
• Genome accession: NZ_CP035234
• Coordinates: 1897043..1897447 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588023.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1902277
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1892043..1902447

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH46_RS09685 (EQH46_10195)	rnpA	1892458..1892829 (-)	372	WP_000739246.1	ribonuclease P protein component	-
EQH46_RS10905	-	1892846..1892977 (-)	132	WP_000768904.1	hypothetical protein	-
EQH46_RS09690 (EQH46_10200)	-	1892978..1894168 (-)	1191	WP_000167768.1	acetate kinase	-
EQH46_RS09695 (EQH46_10205)	comYH	1894219..1895172 (-)	954	WP_000345086.1	class I SAM-dependent methyltransferase	Machinery gene
EQH46_RS09700 (EQH46_10210)	-	1895233..1895827 (-)	595	Protein_1916	class I SAM-dependent methyltransferase	-
EQH46_RS09705 (EQH46_10215)	comGG/cglG	1895930..1896376 (-)	447	WP_001811371.1	competence type IV pilus minor pilin ComGG	Machinery gene
EQH46_RS09710 (EQH46_10220)	comGF/cglF	1896354..1896815 (-)	462	WP_000250523.1	competence type IV pilus minor pilin ComGF	Machinery gene
EQH46_RS09715 (EQH46_10225)	comGE/cglE	1896778..1897080 (-)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
EQH46_RS09720 (EQH46_10230)	comGD/cglD	1897043..1897447 (-)	405	WP_000588023.1	competence type IV pilus minor pilin ComGD	Machinery gene
EQH46_RS09725 (EQH46_10235)	comGC/cglC	1897440..1897766 (-)	327	WP_000738621.1	comG operon protein ComGC	Machinery gene
EQH46_RS09730 (EQH46_10240)	comGB/cglB	1897768..1898784 (-)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
EQH46_RS09735 (EQH46_10245)	comGA/cglA/cilD	1898732..1899673 (-)	942	WP_000249568.1	competence type IV pilus ATPase ComGA	Machinery gene
EQH46_RS09740 (EQH46_10250)	-	1899749..1900114 (-)	366	WP_000286415.1	DUF1033 family protein	-
EQH46_RS09745 (EQH46_10255)	-	1900265..1901323 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14638.82 Da
• Isoelectric Point: 10.2164

>NTDB_id=336623 EQH46_RS09720 WP_000588023.1 1897043..1897447(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1902277]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=336623 EQH46_RS09720 WP_000588023.1 1897043..1897447(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1902277]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTATCCGGCTC
TGTCCAGTCCACTTTTGCAGCAGTAGAGGAGCAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	98.507	100	0.985
comGD/cglD	Streptococcus pneumoniae Rx1	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae D39	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae R6	97.761	100	0.978
comGD/cglD	Streptococcus mitis SK321	97.015	100	0.97
comGD/cglD	Streptococcus mitis NCTC 12261	97.744	99.254	0.97
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47