Detailed information NTG0335668

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: EQ842_RS10180
• Genome accession: NZ_CP035185
• Coordinates: 2130415..2131116 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 11A1213CRGN055
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2125415..2136116

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQ842_RS10150 (EQ842_10150)	-	2125721..2126164 (-)	444	WP_001246675.1	SRPBCC family protein	-
EQ842_RS10155 (EQ842_10155)	tadA	2126234..2126737 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
EQ842_RS10160 (EQ842_10160)	-	2126744..2127868 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
EQ842_RS10165 (EQ842_10165)	ung	2127865..2128578 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
EQ842_RS10170 (EQ842_10170)	-	2128629..2129225 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
EQ842_RS10175 (EQ842_10175)	gspK	2129456..2130415 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
EQ842_RS10180 (EQ842_10180)	xcpW	2130415..2131116 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
EQ842_RS10185 (EQ842_10185)	xcpV	2131116..2131496 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
EQ842_RS10190 (EQ842_10190)	-	2131486..2132040 (-)	555	WP_000841373.1	type II secretion system protein	-
EQ842_RS10195 (EQ842_10195)	-	2132050..2132658 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
EQ842_RS10200 (EQ842_10200)	-	2132696..2133469 (-)	774	WP_000497298.1	TatD family hydrolase	-
EQ842_RS10205 (EQ842_10205)	-	2133487..2133828 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
EQ842_RS10210 (EQ842_10210)	-	2133840..2134820 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
EQ842_RS10215 (EQ842_10215)	kdsB	2134832..2135593 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=335668 EQ842_RS10180 WP_000594589.1 2130415..2131116(-) (xcpW) [Acinetobacter baumannii strain 11A1213CRGN055]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=335668 EQ842_RS10180 WP_000594589.1 2130415..2131116(-) (xcpW) [Acinetobacter baumannii strain 11A1213CRGN055]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996