Detailed information NTG0033540

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: SEQ_RS08935
• Genome accession: NC_012471
• Coordinates: 1840261..1840851 (-)
• Length: 196 a.a.
• NCBI ID: WP_012677455.1
• Uniprot ID: A0A922T644
• Organism: Streptococcus equi subsp. equi 4047
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1835261..1845851

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SEQ_RS08900 (SEQ_1825)	rsmI	1835601..1836467 (-)	867	WP_012680028.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
SEQ_RS08905 (SEQ_1826)	yabA	1836472..1836795 (-)	324	WP_012680029.1	DNA replication initiation control protein YabA	-
SEQ_RS08910 (SEQ_1827)	ricT	1836788..1837588 (-)	801	WP_012680030.1	regulatory iron-sulfur-containing complex subunit RicT	-
SEQ_RS08915 (SEQ_1828)	-	1837585..1838460 (-)	876	WP_012680031.1	DNA polymerase III subunit delta'	-
SEQ_RS08920 (SEQ_1829)	tmk	1838474..1839109 (-)	636	WP_012680032.1	dTMP kinase	-
SEQ_RS08925 (SEQ_1830)	-	1839425..1839709 (-)	285	WP_012516199.1	YlbG family protein	-
SEQ_RS08930 (SEQ_1831)	-	1839710..1840156 (-)	447	WP_012680033.1	YlbF family regulator	-
SEQ_RS08935 (SEQ_1832)	clpP	1840261..1840851 (-)	591	WP_012677455.1	ATP-dependent Clp protease proteolytic subunit	Regulator
SEQ_RS08940 (SEQ_1833)	upp	1841082..1841711 (-)	630	WP_012516202.1	uracil phosphoribosyltransferase	-
SEQ_RS08945 (SEQ_1834)	-	1841861..1843492 (-)	1632	WP_012680034.1	polysaccharide biosynthesis protein	-
SEQ_RS08950 (SEQ_1835)	-	1843578..1845023 (+)	1446	WP_012680035.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21561.76 Da
• Isoelectric Point: 5.0281

>NTDB_id=33540 SEQ_RS08935 WP_012677455.1 1840261..1840851(-) (clpP) [Streptococcus equi subsp. equi 4047]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELA

Nucleotide

• Length: 591 bp

>NTDB_id=33540 SEQ_RS08935 WP_012677455.1 1840261..1840851(-) (clpP) [Streptococcus equi subsp. equi 4047]
ATGATTCCTGTAGTTATTGAACAAACCAGTCGTGGAGAGCGTTCTTATGACATTTATTCACGTCTGTTAAAGGACCGTAT
TATCATGCTGACTGGTCCAGTAGAGGATAATATGGCAAACTCTGTTATTGCGCAGCTCTTGTTTTTAGATGCCCAAGACA
ACACAAAAGATATTTACCTCTATGTGAATACCCCAGGAGGCTCTGTATCAGCTGGTTTAGCTATTGTTGATACGATGAAC
TTTATTAAGGCAGATGTGCAAACCATTGTTATGGGTATGGCTGCTTCTATGGGAACCGTTATTGCTTCATCAGGTGCAAA
GGGCAAGCGCTTTATGCTTCCAAATGCAGAATATATGATTCACCAGCCTATGGGAGGCACAGGAGGTGGTACGCAGCAGA
CGGATATGGCCATTGCTGCTGAGCATTTATTAAAGACACGTCACCGCCTGGAAAAGATTTTGGCACAAAATGCCGGTAAA
ACGATCAAACAAATCCATAAGGACGCTGAGCGTGATTATTGGATGAGCGCAGAAGAAACCCTAGCCTATGGCTTTATTGA
TGAAATCATGGAAAATAATGAGCTAGCTTAG

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	99.487	99.49	0.99
clpP	Streptococcus pyogenes JRS4	99.487	99.49	0.99
clpP	Streptococcus pneumoniae Rx1	91.282	99.49	0.908
clpP	Streptococcus pneumoniae D39	91.282	99.49	0.908
clpP	Streptococcus pneumoniae R6	91.282	99.49	0.908
clpP	Streptococcus mutans UA159	91.282	99.49	0.908
clpP	Streptococcus pneumoniae TIGR4	91.282	99.49	0.908
clpP	Streptococcus thermophilus LMG 18311	89.231	99.49	0.888
clpP	Streptococcus thermophilus LMD-9	89.231	99.49	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.641	99.49	0.852
clpP	Lactococcus lactis subsp. cremoris KW2	85.128	99.49	0.847
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	98.469	0.566
clpP	Bacillus subtilis subsp. subtilis str. 168	57.216	98.98	0.566