Detailed information NTG0033456

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: SZO_RS02010
• Genome accession: NC_012470
• Coordinates: 414063..414653 (+)
• Length: 196 a.a.
• NCBI ID: WP_012677455.1
• Uniprot ID: A0A922T644
• Organism: Streptococcus equi subsp. zooepidemicus
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 409063..419653

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SZO_RS01995 (SZO_03550)	-	409891..411336 (-)	1446	WP_012677453.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-
SZO_RS02000 (SZO_03560)	-	411422..413053 (+)	1632	WP_012677454.1	putative polysaccharide biosynthesis protein	-
SZO_RS02005 (SZO_03570)	upp	413203..413832 (+)	630	WP_012516202.1	uracil phosphoribosyltransferase	-
SZO_RS02010 (SZO_03580)	clpP	414063..414653 (+)	591	WP_012677455.1	ATP-dependent Clp protease proteolytic subunit	Regulator
SZO_RS02015 (SZO_03590)	-	414758..415204 (+)	447	WP_012677456.1	YlbF family regulator	-
SZO_RS02020 (SZO_03600)	-	415205..415489 (+)	285	WP_012677457.1	YlbG family protein	-
SZO_RS02025 (SZO_03610)	tmk	415803..416438 (+)	636	WP_012677458.1	dTMP kinase	-
SZO_RS02030 (SZO_03620)	-	416452..417327 (+)	876	WP_012677459.1	DNA polymerase III subunit delta'	-
SZO_RS02035 (SZO_03630)	ricT	417324..418124 (+)	801	WP_012677460.1	regulatory iron-sulfur-containing complex subunit RicT	-
SZO_RS02040 (SZO_03640)	yabA	418117..418440 (+)	324	WP_012516195.1	DNA replication initiation control protein YabA	-
SZO_RS02045 (SZO_03650)	rsmI	418445..419311 (+)	867	WP_012516194.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21561.76 Da
• Isoelectric Point: 5.0281

>NTDB_id=33456 SZO_RS02010 WP_012677455.1 414063..414653(+) (clpP) [Streptococcus equi subsp. zooepidemicus]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELA

Nucleotide

• Length: 591 bp

>NTDB_id=33456 SZO_RS02010 WP_012677455.1 414063..414653(+) (clpP) [Streptococcus equi subsp. zooepidemicus]
ATGATTCCTGTAGTTATTGAACAAACCAGTCGTGGAGAGCGTTCTTATGACATTTATTCACGTCTGTTAAAGGACCGTAT
TATCATGCTGACTGGTCCAGTAGAGGATAATATGGCAAACTCTGTTATTGCGCAGCTCTTGTTTTTAGATGCCCAAGACA
ACACAAAAGACATTTACCTCTATGTGAATACCCCAGGAGGCTCTGTATCAGCTGGTCTAGCTATTGTGGATACGATGAAC
TTTATTAAGGCAGATGTGCAAACCATTGTTATGGGTATGGCTGCCTCTATGGGAACCGTTATTGCTTCATCAGGTGCAAA
GGGCAAGCGCTTTATGCTTCCAAATGCAGAGTACATGATTCACCAGCCTATGGGAGGCACAGGTGGTGGTACACAGCAGA
CAGATATGGCCATTGCGGCTGAGCATTTATTAAAGACACGTCACCGCTTGGAAAAGATTTTGGCACAAAATGCCGGTAAA
ACGATCAAACAAATCCATAAGGACGCTGAGCGTGATTACTGGATGAGCGCAGAAGAGACCCTAGCCTATGGCTTTATTGA
TGAAATCATGGAAAATAATGAGCTAGCTTAG

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	99.487	99.49	0.99
clpP	Streptococcus pyogenes JRS4	99.487	99.49	0.99
clpP	Streptococcus pneumoniae Rx1	91.282	99.49	0.908
clpP	Streptococcus pneumoniae D39	91.282	99.49	0.908
clpP	Streptococcus pneumoniae R6	91.282	99.49	0.908
clpP	Streptococcus mutans UA159	91.282	99.49	0.908
clpP	Streptococcus pneumoniae TIGR4	91.282	99.49	0.908
clpP	Streptococcus thermophilus LMG 18311	89.231	99.49	0.888
clpP	Streptococcus thermophilus LMD-9	89.231	99.49	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.641	99.49	0.852
clpP	Lactococcus lactis subsp. cremoris KW2	85.128	99.49	0.847
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	98.469	0.566
clpP	Bacillus subtilis subsp. subtilis str. 168	57.216	98.98	0.566