Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | EO946_RS12485 | Genome accession | NZ_CP034943 |
| Coordinates | 2432173..2433210 (-) | Length | 345 a.a. |
| NCBI ID | WP_003226315.1 | Uniprot ID | - |
| Organism | Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2427173..2438210
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EO946_RS12435 (EO946_12435) | tasA | 2427273..2428058 (-) | 786 | WP_003226340.1 | biofilm matrix protein TasA | - |
| EO946_RS12440 (EO946_12440) | sipW | 2428122..2428694 (-) | 573 | WP_003226338.1 | signal peptidase I SipW | - |
| EO946_RS12445 (EO946_12445) | tapA | 2428678..2429439 (-) | 762 | WP_003226335.1 | amyloid fiber anchoring/assembly protein TapA | - |
| EO946_RS12450 (EO946_12450) | - | 2429708..2430034 (+) | 327 | WP_079996407.1 | YqzG/YhdC family protein | - |
| EO946_RS12455 (EO946_12455) | - | 2430076..2430255 (-) | 180 | WP_003226330.1 | YqzE family protein | - |
| EO946_RS12460 (EO946_12460) | comGG | 2430327..2430701 (-) | 375 | WP_003226328.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| EO946_RS12465 (EO946_12465) | comGF | 2430702..2431085 (-) | 384 | WP_032727308.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EO946_RS12470 (EO946_12470) | comGE | 2431111..2431458 (-) | 348 | WP_003226323.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| EO946_RS12475 (EO946_12475) | comGD | 2431442..2431873 (-) | 432 | WP_003226321.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EO946_RS12480 (EO946_12480) | comGC | 2431863..2432159 (-) | 297 | WP_003226319.1 | comG operon protein ComGC | Machinery gene |
| EO946_RS12485 (EO946_12485) | comGB | 2432173..2433210 (-) | 1038 | WP_003226315.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| EO946_RS12490 (EO946_12490) | comGA | 2433197..2434267 (-) | 1071 | WP_003226312.1 | competence protein ComGA | Machinery gene |
| EO946_RS12500 (EO946_12500) | - | 2434480..2434890 (-) | 411 | WP_032727412.1 | CBS domain-containing protein | - |
| EO946_RS12505 (EO946_12505) | - | 2434953..2435906 (-) | 954 | WP_003226308.1 | magnesium transporter CorA family protein | - |
| EO946_RS12510 (EO946_12510) | - | 2436050..2437378 (+) | 1329 | WP_044428668.1 | hemolysin family protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39999.27 Da Isoelectric Point: 9.3768
>NTDB_id=333590 EO946_RS12485 WP_003226315.1 2432173..2433210(-) (comGB) [Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633]
MKQIRKTWKLKDQAQLLKRLGEMTEGGYTLLDGIRLMELQMNKRQVADLADAITRLREGAPFYQVLKSLSFHKEAVGICY
FAEIHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQAVIIPQFSGIYQSMNMETTRSTDMLFAFF
QHIDLVIILLALFAAGIGLYYWLVFKKKSPARQMLIWVRIPLVGNLVRLFNSYFFSLQLSSLLQSGLSIYDSLNAFKHQT
FLPFYRCEAEQVIERLKAGESIETAICESPYYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILIVYLSMLLPMYQMMNQM
MKQIRKTWKLKDQAQLLKRLGEMTEGGYTLLDGIRLMELQMNKRQVADLADAITRLREGAPFYQVLKSLSFHKEAVGICY
FAEIHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQAVIIPQFSGIYQSMNMETTRSTDMLFAFF
QHIDLVIILLALFAAGIGLYYWLVFKKKSPARQMLIWVRIPLVGNLVRLFNSYFFSLQLSSLLQSGLSIYDSLNAFKHQT
FLPFYRCEAEQVIERLKAGESIETAICESPYYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILIVYLSMLLPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=333590 EO946_RS12485 WP_003226315.1 2432173..2433210(-) (comGB) [Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633]
ATGAAACAGATTAGAAAAACCTGGAAGTTAAAGGATCAAGCCCAGTTATTGAAGCGGCTCGGTGAAATGACGGAGGGCGG
ATATACGCTTCTGGATGGAATACGGCTGATGGAGCTTCAGATGAATAAGAGGCAGGTGGCTGACTTGGCTGACGCGATCA
CCCGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTATTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCCGAGATACATGGTGAACTGCCTGCCTCCATGATCCAAAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGATATCCGCTTTTCCTCATCTTCACAGTCGCTGTCATGTTTTATATGTTACAGGCCGTCA
TCATTCCTCAGTTTTCCGGTATTTATCAATCGATGAATATGGAAACCACACGTTCAACTGATATGCTTTTTGCTTTTTTT
CAGCATATTGACCTTGTAATCATATTATTGGCTCTTTTTGCAGCAGGTATCGGGCTTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTTATTTGGGTCAGAATTCCTTTGGTTGGAAATCTTGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTACAATCAGGTCTCTCAATATATGACAGCCTTAACGCATTTAAACATCAAACG
TTTCTCCCTTTTTACCGCTGTGAGGCTGAACAAGTGATTGAACGGCTAAAAGCTGGTGAATCAATTGAAACTGCTATTTG
TGAAAGCCCTTATTATGAAACTGATTTTTCAAAAGTCATATCTCACGGACAGTTGAGCGGCCGCCTTGATCGGGAGCTTT
TCACATACAGTCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAACCTATGATTTAT
GGATTTGTTGCAGCGATGATCTTAATTGTGTATTTATCTATGCTTTTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAACAGATTAGAAAAACCTGGAAGTTAAAGGATCAAGCCCAGTTATTGAAGCGGCTCGGTGAAATGACGGAGGGCGG
ATATACGCTTCTGGATGGAATACGGCTGATGGAGCTTCAGATGAATAAGAGGCAGGTGGCTGACTTGGCTGACGCGATCA
CCCGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTATTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCCGAGATACATGGTGAACTGCCTGCCTCCATGATCCAAAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGATATCCGCTTTTCCTCATCTTCACAGTCGCTGTCATGTTTTATATGTTACAGGCCGTCA
TCATTCCTCAGTTTTCCGGTATTTATCAATCGATGAATATGGAAACCACACGTTCAACTGATATGCTTTTTGCTTTTTTT
CAGCATATTGACCTTGTAATCATATTATTGGCTCTTTTTGCAGCAGGTATCGGGCTTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTTATTTGGGTCAGAATTCCTTTGGTTGGAAATCTTGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTACAATCAGGTCTCTCAATATATGACAGCCTTAACGCATTTAAACATCAAACG
TTTCTCCCTTTTTACCGCTGTGAGGCTGAACAAGTGATTGAACGGCTAAAAGCTGGTGAATCAATTGAAACTGCTATTTG
TGAAAGCCCTTATTATGAAACTGATTTTTCAAAAGTCATATCTCACGGACAGTTGAGCGGCCGCCTTGATCGGGAGCTTT
TCACATACAGTCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAACCTATGATTTAT
GGATTTGTTGCAGCGATGATCTTAATTGTGTATTTATCTATGCTTTTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
91.641 |
93.623 |
0.858 |