Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | EKQ63_RS27210 | Genome accession | NZ_CP034686 |
| Coordinates | 4759010..4759591 (+) | Length | 193 a.a. |
| NCBI ID | WP_001049162.1 | Uniprot ID | A0A9W5QPC2 |
| Organism | Bacillus sp. BD59S | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4754010..4764591
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKQ63_RS27175 (EKQ63_27155) | - | 4755008..4755214 (+) | 207 | WP_000216166.1 | DUF1657 domain-containing protein | - |
| EKQ63_RS27180 (EKQ63_27160) | - | 4755304..4755792 (+) | 489 | WP_087955083.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| EKQ63_RS27185 (EKQ63_27165) | spoVAC | 4755822..4756298 (+) | 477 | WP_016099831.1 | stage V sporulation protein AC | - |
| EKQ63_RS27190 (EKQ63_27170) | spoVAD | 4756299..4757315 (+) | 1017 | WP_000938952.1 | stage V sporulation protein AD | - |
| EKQ63_RS27195 (EKQ63_27175) | spoVAE | 4757312..4757662 (+) | 351 | WP_000575919.1 | stage V sporulation protein AE | - |
| EKQ63_RS27200 (EKQ63_27180) | - | 4757672..4757878 (+) | 207 | WP_002167398.1 | DUF1657 domain-containing protein | - |
| EKQ63_RS27205 (EKQ63_27185) | - | 4757899..4758768 (+) | 870 | WP_000018910.1 | DUF421 domain-containing protein | - |
| EKQ63_RS27210 (EKQ63_27190) | clpP | 4759010..4759591 (+) | 582 | WP_001049162.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| EKQ63_RS27220 (EKQ63_27200) | - | 4759990..4760238 (-) | 249 | WP_000250307.1 | HPr family phosphocarrier protein | - |
| EKQ63_RS27225 (EKQ63_27205) | whiA | 4760262..4761212 (-) | 951 | WP_000006561.1 | DNA-binding protein WhiA | - |
| EKQ63_RS27230 (EKQ63_27210) | - | 4761302..4762255 (-) | 954 | WP_000712175.1 | uridine diphosphate-N-acetylglucosamine-binding protein YvcK | - |
| EKQ63_RS27235 (EKQ63_27215) | rapZ | 4762259..4763140 (-) | 882 | WP_087955086.1 | RNase adapter RapZ | - |
| EKQ63_RS27240 (EKQ63_27220) | - | 4763161..4763619 (-) | 459 | WP_001190080.1 | NUDIX hydrolase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21419.67 Da Isoelectric Point: 5.0423
>NTDB_id=332510 EKQ63_RS27210 WP_001049162.1 4759010..4759591(+) (clpP) [Bacillus sp. BD59S]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=332510 EKQ63_RS27210 WP_001049162.1 4759010..4759591(+) (clpP) [Bacillus sp. BD59S]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGCGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCGCAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGTGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCTAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTATTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATTTTTACAAATCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGCGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCGCAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGTGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCTAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTATTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATTTTTACAAATCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
90.104 |
99.482 |
0.896 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.021 |
97.409 |
0.653 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
58.854 |
99.482 |
0.585 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pyogenes JRS4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus mutans UA159 |
55.44 |
100 |
0.554 |