Detailed information NTG0331346

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: EJF26_RS04560
• Genome accession: NZ_CP034442
• Coordinates: 893884..894474 (-)
• Length: 196 a.a.
• NCBI ID: WP_000613467.1
• Uniprot ID: A0AAX0N3L0
• Organism: Streptococcus oralis subsp. dentisani strain F0392
• Function: degradation of ComX; degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 888884..899474

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EJF26_RS04530	-	889575..890339 (-)	765	WP_001186011.1	ABC transporter ATP-binding protein	-
EJF26_RS04535	-	890339..891295 (-)	957	WP_000856255.1	branched-chain amino acid ABC transporter permease	-
EJF26_RS04540	-	891299..892168 (-)	870	WP_000941417.1	branched-chain amino acid ABC transporter permease	-
EJF26_RS04545	-	892288..893448 (-)	1161	WP_000726136.1	ABC transporter substrate-binding protein	-
EJF26_RS04550	-	893536..893805 (-)	270	WP_000462107.1	YlbG family protein	-
EJF26_RS04560	clpP	893884..894474 (-)	591	WP_000613467.1	ATP-dependent Clp protease proteolytic subunit ClpP	Regulator
EJF26_RS04565	upp	894653..895282 (-)	630	WP_025169005.1	uracil phosphoribosyltransferase	-
EJF26_RS04570	-	895371..895838 (-)	468	WP_000136984.1	cytidine/deoxycytidylate deaminase family protein	-
EJF26_RS04575	-	895857..896414 (-)	558	WP_000003897.1	TetR/AcrR family transcriptional regulator	-
EJF26_RS04580	-	896539..897384 (+)	846	WP_000219960.1	DegV family protein	-
EJF26_RS04585	-	897442..898623 (+)	1182	WP_004246837.1	NAD(P)/FAD-dependent oxidoreductase	-
EJF26_RS04590	-	898637..899158 (+)	522	WP_000400041.1	DUF1697 domain-containing protein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21362.37 Da
• Isoelectric Point: 4.4829

>NTDB_id=331346 EJF26_RS04560 WP_000613467.1 893884..894474(-) (clpP) [Streptococcus oralis subsp. dentisani strain F0392]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEQILADNSGK
SVEQIHADAERDYWMSAQETLEYGFIDEIMANNSLS

Nucleotide

• Length: 591 bp

>NTDB_id=331346 EJF26_RS04560 WP_000613467.1 893884..894474(-) (clpP) [Streptococcus oralis subsp. dentisani strain F0392]
ATGATTCCTGTAGTTATTGAACAAACAAGCCGTGGAGAACGTTCCTATGACATTTACTCTCGTCTTCTGAAAGACCGCAT
CATCATGCTAACTGGGCCAGTCGAAGATAATATGGCCAACTCAGTTATTGCCCAATTACTCTTCTTGGATGCCCAAGACA
GCACAAAAGATATTTACCTTTATGTCAACACACCTGGAGGTTCTGTTTCGGCTGGTTTGGCAATTGTTGATACCATGAAC
TTTATCAAGGCTGATGTCCAAACAATCGTTATGGGGATGGCTGCATCTATGGGGACTGTTATTGCATCAAGTGGTGCAAA
AGGCAAACGCTTCATGCTTCCAAATGCAGAGTACATGATTCACCAACCAATGGGTGGTACAGGTGGTGGTACCCAACAGA
CAGATATGGCAATCGCTGCAGAGCACTTGCTTAAAACTCGTAAGACTTTGGAGCAAATCCTTGCAGATAACTCAGGTAAA
TCAGTTGAGCAAATTCACGCGGATGCTGAACGTGATTACTGGATGAGTGCCCAAGAAACGCTCGAATATGGCTTTATTGA
TGAAATCATGGCCAATAATTCTTTAAGCTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pneumoniae Rx1	95.408	100	0.954
clpP	Streptococcus pneumoniae R6	95.408	100	0.954
clpP	Streptococcus pneumoniae TIGR4	95.408	100	0.954
clpP	Streptococcus pneumoniae D39	95.408	100	0.954
clpP	Streptococcus pyogenes JRS4	92.308	99.49	0.918
clpP	Streptococcus pyogenes MGAS315	92.308	99.49	0.918
clpP	Streptococcus thermophilus LMD-9	91.282	99.49	0.908
clpP	Streptococcus thermophilus LMG 18311	91.282	99.49	0.908
clpP	Streptococcus mutans UA159	88.718	99.49	0.883
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	87.692	99.49	0.872
clpP	Lactococcus lactis subsp. cremoris KW2	87.179	99.49	0.867
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.031	98.469	0.571
clpP	Bacillus subtilis subsp. subtilis str. 168	57.292	97.959	0.561