Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   BAMF_RS20805 Genome accession   NC_014551
Coordinates   108547..109629 (+) Length   360 a.a.
NCBI ID   WP_013350793.1    Uniprot ID   A0A9P1NFM6
Organism   Bacillus amyloliquefaciens DSM 7 = ATCC 23350     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 103547..114629
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAMF_RS20790 (BAMF_0084) - 103547..104638 (+) 1092 WP_013350790.1 protein arginine kinase -
  BAMF_RS20795 (BAMF_0085) clpC 104635..107070 (+) 2436 WP_013350791.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  BAMF_RS20800 (BAMF_0086) radA/sms 107164..108543 (+) 1380 WP_013350792.1 DNA repair protein RadA Machinery gene
  BAMF_RS20805 (BAMF_0087) disA 108547..109629 (+) 1083 WP_013350793.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  BAMF_RS20810 (BAMF_0088) - 109743..110843 (+) 1101 WP_013350794.1 PIN/TRAM domain-containing protein -
  BAMF_RS20815 (BAMF_0089) ispD 110857..111555 (+) 699 WP_013350795.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  BAMF_RS20820 (BAMF_0090) ispF 111548..112024 (+) 477 WP_013350796.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  BAMF_RS20825 (BAMF_0091) gltX 112116..113567 (+) 1452 WP_013350797.1 glutamate--tRNA ligase -
  BAMF_RS20830 (BAMF_0093) cysE 113878..114531 (+) 654 WP_003156410.1 serine O-acetyltransferase -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40590.11 Da        Isoelectric Point: 5.3471

>NTDB_id=32905 BAMF_RS20805 WP_013350793.1 108547..109629(+) (disA) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
MEKEKKGAKQELDLSAILQFVAPGTPLRAGIENVLRANTGGLIVVGYNDKVKQVVDGGFHINTSFAPAHLYELAKMDGAI
ILSDSGQKILYANTQLMPEATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQDSMKYTLKDIGFILTKANQAI
QTLEKYKTILDKTITALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLICLQVIELITDMEEEAALF
IKDYVKEKIKDPFVLLKELQDMSSYDLLDDSILFKLLGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGFLPS
ITEATAEELDDVEGIGEVRAQKIKKGLKRLQEKHYIDRQL

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=32905 BAMF_RS20805 WP_013350793.1 108547..109629(+) (disA) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAATCCTGCAGTTCGTTGCACCGGGAACCCCGCT
CAGAGCCGGGATAGAAAATGTACTTCGGGCAAATACAGGCGGCCTGATTGTTGTCGGATACAACGATAAGGTAAAACAAG
TCGTGGATGGCGGTTTTCATATTAATACATCATTTGCGCCCGCTCACTTATACGAGCTGGCCAAAATGGACGGAGCCATT
ATTTTAAGTGATTCCGGCCAGAAAATTCTTTATGCGAATACGCAGCTTATGCCGGAGGCGACCATTTCTTCTTCAGAAAC
GGGAATGAGGCACCGTACAGCGGAACGGGTGGCAAAGCAGACCGGCTGTCTCGTCATAGCCATTTCTGAACGCAGAAATG
TCATTACGTTATACCAGGACAGCATGAAGTACACACTAAAGGACATAGGCTTTATTTTAACAAAGGCTAACCAGGCCATT
CAAACGCTTGAGAAGTATAAAACCATTCTAGACAAAACGATTACAGCTTTAAACGCCTTAGAATTTGAGGAGCTTGTGAC
ATTCAGTGACGTGCTGTCCGTCATGCACCGGTATGAAATGGTGCTCCGTATAAAAAATGAAATCAACATGTATATTAAAG
AACTCGGAACGGAAGGCCACTTAATCTGTCTGCAGGTGATTGAACTGATTACGGATATGGAAGAAGAAGCGGCTCTTTTC
ATCAAAGACTATGTAAAAGAAAAAATCAAAGATCCGTTCGTGCTGTTAAAAGAGCTTCAGGATATGTCCAGCTATGATCT
GCTTGATGATTCCATTTTGTTTAAGCTGCTTGGATATCCCGCTTCTACCAATCTCGATGATTATGTTCTGCCGAGAGGAT
ACAGGCTGCTGAACAAAATTCCGCGTCTGCCGATGCCGATTGTTGAAAATGTGGTTGAGGCATTCGGATTTTTGCCAAGC
ATAACGGAAGCGACAGCCGAAGAACTGGATGATGTTGAAGGTATCGGCGAGGTGCGCGCCCAAAAAATCAAAAAAGGCTT
AAAACGCCTCCAAGAAAAACACTATATAGATAGACAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A9P1NFM6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

94.722

100

0.947


Multiple sequence alignment