Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   EG219_RS14005 Genome accession   NZ_CP034037
Coordinates   2834044..2834688 (-) Length   214 a.a.
NCBI ID   WP_003152052.1    Uniprot ID   A3KLB8
Organism   Bacillus velezensis strain BCSo1     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2829044..2839688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EG219_RS13970 (EG219_13970) - 2830229..2830660 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  EG219_RS13975 (EG219_13975) - 2830660..2831001 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  EG219_RS13980 (EG219_13980) - 2830994..2832475 (+) 1482 WP_007408671.1 Na+/H+ antiporter subunit D -
  EG219_RS13985 (EG219_13985) - 2832481..2832957 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  EG219_RS13990 (EG219_13990) - 2832957..2833241 (+) 285 WP_007408673.1 Na(+)/H(+) antiporter subunit F1 -
  EG219_RS13995 (EG219_13995) mnhG 2833225..2833599 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  EG219_RS14000 (EG219_14000) - 2833639..2834022 (-) 384 WP_007408674.1 hotdog fold thioesterase -
  EG219_RS14005 (EG219_14005) comA 2834044..2834688 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  EG219_RS14010 (EG219_14010) - 2834769..2836528 (-) 1760 Protein_2695 sensor histidine kinase -
  EG219_RS18800 - 2836410..2836691 (-) 282 WP_240631631.1 hypothetical protein -
  EG219_RS14015 (EG219_14015) degQ 2836822..2836962 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  EG219_RS14025 (EG219_14025) - 2837428..2837769 (+) 342 WP_007408677.1 hypothetical protein -
  EG219_RS14030 (EG219_14030) - 2837776..2838999 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24271.68 Da        Isoelectric Point: 4.9953

>NTDB_id=328561 EG219_RS14005 WP_003152052.1 2834044..2834688(-) (comA) [Bacillus velezensis strain BCSo1]
MKKILVIDDHPAVMEGTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTPRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=328561 EG219_RS14005 WP_003152052.1 2834044..2834688(-) (comA) [Bacillus velezensis strain BCSo1]
ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGGGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTCAGTCCTGATGCCAGTGAACAATTCGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATAGAGCTTTCTAAGAAAATCTTAAAAGAGAATCCTCTCTGTAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCATGGCGCCATCAGCAAAAC
CGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACCCCGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCGCTTCACTTAAGCAAGCGGTCAATTGAATA
CAGCCTGACATCCATTTTTAACAAGCTGAATGTCGGCTCCCGAACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-117)

Bacterial regulatory proteins, luxR family (GerE)

(153-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

86.449

100

0.864

Multiple sequence alignment