Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | FNV65_RS11960 | Genome accession | NZ_CP041612 |
| Coordinates | 2570257..2570913 (+) | Length | 218 a.a. |
| NCBI ID | WP_097283746.1 | Uniprot ID | - |
| Organism | Streptomyces sp. S1A1-8 | ||
| Function | degradation of ComX; degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2565257..2575913
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNV65_RS11930 (FNV65_12055) | ureG | 2565668..2566351 (-) | 684 | WP_054228976.1 | urease accessory protein UreG | - |
| FNV65_RS11935 (FNV65_12060) | - | 2566487..2567161 (-) | 675 | WP_143612783.1 | urease accessory UreF family protein | - |
| FNV65_RS11940 (FNV65_12065) | - | 2567161..2568882 (-) | 1722 | WP_143612784.1 | urease subunit alpha | - |
| FNV65_RS11945 (FNV65_12070) | - | 2568875..2569186 (-) | 312 | WP_097283745.1 | urease subunit beta | - |
| FNV65_RS11950 (FNV65_12075) | - | 2569204..2569506 (-) | 303 | WP_054229180.1 | urease subunit gamma | - |
| FNV65_RS11955 (FNV65_12080) | - | 2569776..2570054 (-) | 279 | WP_060902456.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| FNV65_RS11960 (FNV65_12085) | clpP | 2570257..2570913 (+) | 657 | WP_097283746.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| FNV65_RS11965 (FNV65_12090) | - | 2570921..2571226 (+) | 306 | WP_054228981.1 | hypothetical protein | - |
| FNV65_RS11970 (FNV65_12095) | - | 2571763..2572236 (+) | 474 | WP_054228982.1 | C40 family peptidase | - |
| FNV65_RS11975 (FNV65_12100) | - | 2572324..2572845 (+) | 522 | WP_097283747.1 | DUF6328 family protein | - |
| FNV65_RS11980 (FNV65_12105) | - | 2573187..2573645 (-) | 459 | WP_054228985.1 | ATP-binding protein | - |
| FNV65_RS11985 (FNV65_12110) | - | 2573858..2574715 (+) | 858 | WP_097283748.1 | helix-turn-helix transcriptional regulator | - |
| FNV65_RS11990 (FNV65_12115) | - | 2574729..2574953 (+) | 225 | WP_075025332.1 | DUF397 domain-containing protein | - |
Sequence
Protein
Download Length: 218 a.a. Molecular weight: 23516.60 Da Isoelectric Point: 4.7681
>NTDB_id=327277 FNV65_RS11960 WP_097283746.1 2570257..2570913(+) (clpP) [Streptomyces sp. S1A1-8]
MNEPSARHVLPEFTERTSTGHRTLDPYSKLLDERIVFLGTPIDDTSANDVMAQFMHLEYLAPDQDIALYINSPGGSFSAM
TAIYDTMQFVSCDVETTCLGQAASAAAVLLAGGAPGKRFALPGARVLIHQPSLPEPVQGQASDLALQAEELMRTRRLLED
MLVRHTGQSPEQVAADIERDKILDAQAALAYGLVDGIIPSRKTSRTAPGARNATPDAR
MNEPSARHVLPEFTERTSTGHRTLDPYSKLLDERIVFLGTPIDDTSANDVMAQFMHLEYLAPDQDIALYINSPGGSFSAM
TAIYDTMQFVSCDVETTCLGQAASAAAVLLAGGAPGKRFALPGARVLIHQPSLPEPVQGQASDLALQAEELMRTRRLLED
MLVRHTGQSPEQVAADIERDKILDAQAALAYGLVDGIIPSRKTSRTAPGARNATPDAR
Nucleotide
Download Length: 657 bp
>NTDB_id=327277 FNV65_RS11960 WP_097283746.1 2570257..2570913(+) (clpP) [Streptomyces sp. S1A1-8]
ATGAATGAACCGTCCGCCCGTCATGTCCTGCCCGAGTTCACCGAGCGGACGAGCACGGGGCACCGGACCCTGGATCCGTA
CTCGAAGCTGCTCGACGAGCGGATCGTGTTCCTCGGGACGCCGATCGACGACACCTCGGCGAACGACGTGATGGCGCAGT
TCATGCACCTCGAATACCTGGCGCCGGACCAGGACATCGCGCTGTACATCAACTCCCCCGGCGGCTCGTTCAGTGCGATG
ACGGCGATCTACGACACGATGCAGTTCGTCAGCTGCGACGTGGAGACCACCTGCCTGGGGCAGGCCGCGTCGGCCGCCGC
CGTGCTGCTGGCCGGCGGCGCGCCGGGCAAGCGGTTCGCGCTGCCGGGGGCCCGGGTGCTGATCCACCAGCCGTCACTTC
CCGAGCCGGTACAGGGACAGGCGAGCGATCTGGCCCTCCAGGCCGAGGAGTTGATGCGCACTCGGAGGCTGCTGGAGGAC
ATGCTCGTACGGCACACGGGGCAGAGTCCTGAACAGGTCGCCGCCGACATCGAGCGGGACAAGATCCTGGACGCTCAGGC
CGCGTTGGCGTACGGACTGGTGGACGGGATCATCCCCAGCCGCAAGACCTCGCGCACCGCGCCCGGTGCGAGGAACGCCA
CACCCGACGCGAGGTGA
ATGAATGAACCGTCCGCCCGTCATGTCCTGCCCGAGTTCACCGAGCGGACGAGCACGGGGCACCGGACCCTGGATCCGTA
CTCGAAGCTGCTCGACGAGCGGATCGTGTTCCTCGGGACGCCGATCGACGACACCTCGGCGAACGACGTGATGGCGCAGT
TCATGCACCTCGAATACCTGGCGCCGGACCAGGACATCGCGCTGTACATCAACTCCCCCGGCGGCTCGTTCAGTGCGATG
ACGGCGATCTACGACACGATGCAGTTCGTCAGCTGCGACGTGGAGACCACCTGCCTGGGGCAGGCCGCGTCGGCCGCCGC
CGTGCTGCTGGCCGGCGGCGCGCCGGGCAAGCGGTTCGCGCTGCCGGGGGCCCGGGTGCTGATCCACCAGCCGTCACTTC
CCGAGCCGGTACAGGGACAGGCGAGCGATCTGGCCCTCCAGGCCGAGGAGTTGATGCGCACTCGGAGGCTGCTGGAGGAC
ATGCTCGTACGGCACACGGGGCAGAGTCCTGAACAGGTCGCCGCCGACATCGAGCGGGACAAGATCCTGGACGCTCAGGC
CGCGTTGGCGTACGGACTGGTGGACGGGATCATCCCCAGCCGCAAGACCTCGCGCACCGCGCCCGGTGCGAGGAACGCCA
CACCCGACGCGAGGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus pneumoniae Rx1 |
45.596 |
88.532 |
0.404 |
| clpP | Streptococcus pneumoniae D39 |
45.596 |
88.532 |
0.404 |
| clpP | Streptococcus pneumoniae R6 |
45.596 |
88.532 |
0.404 |
| clpP | Streptococcus pneumoniae TIGR4 |
45.596 |
88.532 |
0.404 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
45.55 |
87.615 |
0.399 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
46.032 |
86.697 |
0.399 |
| clpP | Streptococcus mutans UA159 |
44.33 |
88.991 |
0.394 |
| clpP | Streptococcus thermophilus LMG 18311 |
43.299 |
88.991 |
0.385 |
| clpP | Streptococcus thermophilus LMD-9 |
43.299 |
88.991 |
0.385 |
| clpP | Streptococcus pyogenes JRS4 |
42.784 |
88.991 |
0.381 |
| clpP | Streptococcus pyogenes MGAS315 |
42.784 |
88.991 |
0.381 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
42.268 |
88.991 |
0.376 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
42.487 |
88.532 |
0.376 |