Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   EHF39_RS06510 Genome accession   NZ_CP033908
Coordinates   1246288..1246470 (-) Length   60 a.a.
NCBI ID   WP_011528776.1    Uniprot ID   A0A660A5W9
Organism   Streptococcus pyogenes strain RLGH     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1241288..1251470
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EHF39_RS06495 (EHF39_06495) - 1241726..1242421 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  EHF39_RS06500 (EHF39_06500) - 1242660..1243595 (+) 936 WP_021299339.1 dihydroorotate oxidase -
  EHF39_RS06505 (EHF39_06505) - 1243895..1245757 (-) 1863 WP_011528775.1 heavy metal translocating P-type ATPase -
  EHF39_RS06510 (EHF39_06510) prx 1246288..1246470 (-) 183 WP_011528776.1 hypothetical protein Regulator
  EHF39_RS06515 (EHF39_06515) entC3 1246583..1247365 (-) 783 WP_002988472.1 enterotoxin type C3 EntC3 -
  EHF39_RS06520 (EHF39_06520) - 1247613..1248737 (-) 1125 WP_002988467.1 Fic family protein -
  EHF39_RS06525 (EHF39_06525) - 1248873..1250090 (-) 1218 WP_011528778.1 peptidoglycan amidohydrolase family protein -
  EHF39_RS06530 (EHF39_06530) - 1250209..1250436 (-) 228 WP_003058873.1 phage holin -
  EHF39_RS06535 (EHF39_06535) - 1250433..1250705 (-) 273 WP_011017397.1 hypothetical protein -
  EHF39_RS06540 (EHF39_06540) - 1250717..1251349 (-) 633 WP_011528779.1 hypothetical protein -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6840.81 Da        Isoelectric Point: 4.7023

>NTDB_id=326978 EHF39_RS06510 WP_011528776.1 1246288..1246470(-) (prx) [Streptococcus pyogenes strain RLGH]
MLTYNEFKQAIDNGYIAGDTVAIVRKDGQIFDYVLPHEKVKNGEVVTKEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=326978 EHF39_RS06510 WP_011528776.1 1246288..1246470(-) (prx) [Streptococcus pyogenes strain RLGH]
ATGCTAACATACAACGAGTTTAAGCAAGCGATTGACAATGGATATATCGCAGGCGATACAGTAGCGATCGTGCGTAAAGA
CGGACAGATTTTTGATTATGTGTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACTAAGGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

98.333

100

0.983

  prx Streptococcus pyogenes MGAS315

83.333

100

0.833

  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

71.667

100

0.717

  prx Streptococcus pyogenes MGAS315

87.805

68.333

0.6

  prx Streptococcus pyogenes MGAS315

81.395

71.667

0.583

  prx Streptococcus pyogenes MGAS315

76.19

70

0.533


Multiple sequence alignment