Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   FNL90_RS04020 Genome accession   NZ_CP041408
Coordinates   758718..758906 (+) Length   62 a.a.
NCBI ID   WP_002984426.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 37-97S     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 753718..763906
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FNL90_RS03990 (FNL90_04110) - 754293..754454 (+) 162 WP_002987333.1 hypothetical protein -
  FNL90_RS03995 (FNL90_04115) - 754457..755074 (+) 618 WP_047235258.1 DUF1366 domain-containing protein -
  FNL90_RS04000 (FNL90_04120) - 755084..755359 (+) 276 WP_002987582.1 hypothetical protein -
  FNL90_RS04005 (FNL90_04125) - 755356..755583 (+) 228 WP_003058873.1 phage holin -
  FNL90_RS04010 (FNL90_04130) - 755699..756904 (+) 1206 WP_002984418.1 glucosaminidase domain-containing protein -
  FNL90_RS04015 (FNL90_04140) sda3 757680..758480 (-) 801 WP_011285611.1 streptodornase Sda3 -
  FNL90_RS04020 (FNL90_04145) prx 758718..758906 (+) 189 WP_002984426.1 hypothetical protein Regulator
  FNL90_RS04030 (FNL90_04155) - 759497..760111 (+) 615 WP_047235259.1 TVP38/TMEM64 family protein -
  FNL90_RS04035 (FNL90_04160) - 760238..761023 (-) 786 WP_047235260.1 hypothetical protein -
  FNL90_RS04040 (FNL90_04165) - 761033..761731 (-) 699 WP_002984437.1 ABC transporter ATP-binding protein -
  FNL90_RS04045 (FNL90_04170) - 761747..762103 (-) 357 WP_047235261.1 GntR family transcriptional regulator -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7253.32 Da        Isoelectric Point: 4.2550

>NTDB_id=325869 FNL90_RS04020 WP_002984426.1 758718..758906(+) (prx) [Streptococcus pyogenes strain 37-97S]
MLTYDEFKQAIDRGYITGDTVMIVRKNGQIFDYVLPHEKVKNGEVVTEEIVEEVMVELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=325869 FNL90_RS04020 WP_002984426.1 758718..758906(+) (prx) [Streptococcus pyogenes strain 37-97S]
ATGCTAACATACGACGAGTTTAAACAAGCGATTGACCGTGGATATATCACAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCACATGAGAAAGTAAAAAATGGAGAAGTTGTGACCGAGGAGATAGTGGAAGAAG
TGATGGTGGAATTAGACTATATCAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

90.323

100

0.903
  prx Streptococcus pyogenes MGAS8232

87.931

93.548

0.823
  prx Streptococcus pyogenes MGAS315

87.931

93.548

0.823
  prx Streptococcus pyogenes MGAS315

83.051

95.161

0.79
  prx Streptococcus pyogenes MGAS315

79.661

95.161

0.758
  prx Streptococcus pyogenes MGAS315

87.805

66.129

0.581
  prx Streptococcus pyogenes MGAS315

78.571

67.742

0.532

Multiple sequence alignment