Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   EGX78_RS01645 Genome accession   NZ_CP033767
Coordinates   304500..305051 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain FDAARGOS_534     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 299500..310051
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX78_RS01645 (EGX78_01650) comX/sigX/comX2/sigX2 304500..305051 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  EGX78_RS01650 (EGX78_01655) - 305610..306137 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  EGX78_RS01655 (EGX78_01660) yqeH 306137..307255 (+) 1119 WP_032461787.1 ribosome biogenesis GTPase YqeH -
  EGX78_RS01660 (EGX78_01665) yhbY 307280..307588 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  EGX78_RS01665 (EGX78_01670) - 307657..308289 (+) 633 WP_002991091.1 nicotinate-nucleotide adenylyltransferase -
  EGX78_RS01670 (EGX78_01675) yqeK 308286..308879 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  EGX78_RS01675 (EGX78_01680) rsfS 308903..309256 (+) 354 WP_002991088.1 ribosome silencing factor -
  EGX78_RS01680 (EGX78_01685) - 309304..310047 (+) 744 WP_002991085.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=325502 EGX78_RS01645 WP_010921894.1 304500..305051(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain FDAARGOS_534]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=325502 EGX78_RS01645 WP_010921894.1 304500..305051(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain FDAARGOS_534]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGATGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.