Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | EFI48_RS17580 | Genome accession | NZ_CP033604 |
| Coordinates | 3850190..3850510 (+) | Length | 106 a.a. |
| NCBI ID | WP_123173720.1 | Uniprot ID | A0AAN1QG45 |
| Organism | Aeromonas veronii strain MS-18-37 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3845190..3855510
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFI48_RS17565 (EFI48_17565) | yfbV | 3845629..3846069 (-) | 441 | WP_005339116.1 | terminus macrodomain insulation protein YfbV | - |
| EFI48_RS17570 (EFI48_17570) | - | 3846374..3847576 (+) | 1203 | WP_005349210.1 | acetate kinase | - |
| EFI48_RS17575 (EFI48_17575) | pta | 3847632..3849812 (+) | 2181 | WP_005339119.1 | phosphate acetyltransferase | - |
| EFI48_RS17580 (EFI48_17580) | comE1/comEA | 3850190..3850510 (+) | 321 | WP_123173720.1 | ComEA family DNA-binding protein | Machinery gene |
| EFI48_RS17585 (EFI48_17585) | galU | 3850606..3851517 (+) | 912 | WP_123173721.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| EFI48_RS17590 (EFI48_17590) | - | 3851731..3853128 (+) | 1398 | WP_021231963.1 | peptide MFS transporter | - |
| EFI48_RS17595 (EFI48_17595) | - | 3853203..3854174 (-) | 972 | WP_123173722.1 | response regulator | - |
| EFI48_RS17600 (EFI48_17600) | - | 3854415..3855104 (+) | 690 | WP_123173723.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11300.30 Da Isoelectric Point: 9.6564
>NTDB_id=324273 EFI48_RS17580 WP_123173720.1 3850190..3850510(+) (comE1/comEA) [Aeromonas veronii strain MS-18-37]
MLMKKLSAIMLLACLPLFSQPVLAADKAAPKQTATTEVAKETGKLNINTATLAELTSLKGIGDKKAQAIVDYREKQGKFT
SVDQLADVNGIGPATLEANRDMIIVK
MLMKKLSAIMLLACLPLFSQPVLAADKAAPKQTATTEVAKETGKLNINTATLAELTSLKGIGDKKAQAIVDYREKQGKFT
SVDQLADVNGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=324273 EFI48_RS17580 WP_123173720.1 3850190..3850510(+) (comE1/comEA) [Aeromonas veronii strain MS-18-37]
ATGCTGATGAAGAAGCTCTCTGCAATCATGCTGCTGGCCTGCTTGCCCCTGTTCAGCCAACCTGTGCTGGCTGCAGATAA
GGCAGCACCCAAGCAAACAGCCACGACCGAGGTCGCCAAGGAGACCGGCAAGCTGAACATCAATACGGCCACCCTTGCCG
AACTCACCAGCCTGAAAGGGATTGGCGACAAGAAGGCACAAGCCATCGTCGACTATCGGGAAAAACAGGGAAAGTTCACC
TCGGTCGATCAGCTGGCGGATGTCAATGGCATTGGCCCGGCCACGCTGGAAGCCAACAGGGACATGATAATAGTCAAATA
A
ATGCTGATGAAGAAGCTCTCTGCAATCATGCTGCTGGCCTGCTTGCCCCTGTTCAGCCAACCTGTGCTGGCTGCAGATAA
GGCAGCACCCAAGCAAACAGCCACGACCGAGGTCGCCAAGGAGACCGGCAAGCTGAACATCAATACGGCCACCCTTGCCG
AACTCACCAGCCTGAAAGGGATTGGCGACAAGAAGGCACAAGCCATCGTCGACTATCGGGAAAAACAGGGAAAGTTCACC
TCGGTCGATCAGCTGGCGGATGTCAATGGCATTGGCCCGGCCACGCTGGAAGCCAACAGGGACATGATAATAGTCAAATA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
47.788 |
100 |
0.509 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
46.018 |
100 |
0.491 |
| comEA | Vibrio cholerae strain A1552 |
46.602 |
97.17 |
0.453 |
| comEA | Vibrio cholerae C6706 |
46.602 |
97.17 |
0.453 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
45.361 |
91.509 |
0.415 |
| comEA | Legionella pneumophila str. Paris |
40.404 |
93.396 |
0.377 |
| comEA | Legionella pneumophila strain ERS1305867 |
40.404 |
93.396 |
0.377 |
| comEA | Acinetobacter baylyi ADP1 |
51.316 |
71.698 |
0.368 |