Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   FIU13_RS00025 Genome accession   NZ_CP040997
Coordinates   1874..2056 (+) Length   60 a.a.
NCBI ID   WP_029714017.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain FDAARGOS_774     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1..7056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIU13_RS00010 (FIU13_00010) - 271..510 (-) 240 WP_011054447.1 hypothetical protein -
  FIU13_RS00015 (FIU13_00015) - 774..1025 (-) 252 WP_011054448.1 hypothetical protein -
  FIU13_RS10060 - 1166..1312 (-) 147 WP_011054449.1 hypothetical protein -
  FIU13_RS00020 (FIU13_00020) - 1466..1675 (+) 210 WP_011054450.1 helix-turn-helix domain-containing protein -
  FIU13_RS00025 (FIU13_00025) prx 1874..2056 (+) 183 WP_029714017.1 hypothetical protein Regulator
  FIU13_RS10065 - 2279..2686 (+) 408 Protein_6 nucleoside-diphosphate kinase -
  FIU13_RS00040 (FIU13_00040) lepA 2810..4642 (+) 1833 WP_010922253.1 translation elongation factor 4 -
  FIU13_RS00045 (FIU13_00045) slc2 4900..5718 (+) 819 WP_029714016.1 LPXTG-anchored collagen-like adhesin Scl2/SclB -
  FIU13_RS00050 (FIU13_00050) msrB 5904..6341 (+) 438 WP_010922255.1 peptide-methionine (R)-S-oxide reductase MsrB -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6890.90 Da        Isoelectric Point: 4.1947

>NTDB_id=323862 FIU13_RS00025 WP_029714017.1 1874..2056(+) (prx) [Streptococcus pyogenes strain FDAARGOS_774]
MLTYDEFKQAIDNGYITADTVAIVRKNGLIFDYVLPHESVRSCEIVIEERVAEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=323862 FIU13_RS00025 WP_029714017.1 1874..2056(+) (prx) [Streptococcus pyogenes strain FDAARGOS_774]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACACAGTAGCGATCGTGCGTAAAAA
CGGATTGATATTTGATTATGTGTTGCCGCACGAGTCTGTGAGATCGTGTGAGATTGTGATCGAGGAGAGGGTGGCGGAGG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS8232

73.333

100

0.733
  prx Streptococcus pyogenes MGAS315

80.952

70

0.567
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55