Detailed information NTG0323284

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: FDP16_RS03245
• Genome accession: NZ_CP040798
• Coordinates: 637646..638263 (+)
• Length: 205 a.a.
• NCBI ID: WP_256254472.1
• Uniprot ID: -
• Organism: Streptococcus sanguinis strain CGMH058
• Function: degradation of ComX; degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 632646..643263

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FDP16_RS03225 (FDP16_03340)	-	633034..634290 (+)	1257	WP_176798556.1	site-specific integrase	-
FDP16_RS03230 (FDP16_03345)	-	634448..635605 (+)	1158	WP_176798557.1	cystathionine gamma-synthase	-
FDP16_RS03235 (FDP16_03350)	-	635607..636773 (+)	1167	WP_176798558.1	MalY/PatB family protein	-
FDP16_RS03240 (FDP16_03360)	upp	636936..637565 (+)	630	WP_002903228.1	uracil phosphoribosyltransferase	-
FDP16_RS03245 (FDP16_03365)	clpP	637646..638263 (+)	618	WP_256254472.1	ATP-dependent Clp protease proteolytic subunit	Regulator
FDP16_RS03250 (FDP16_03370)	-	638416..638685 (+)	270	WP_176798560.1	YlbG family protein	-
FDP16_RS03255 (FDP16_03375)	-	638774..639934 (+)	1161	WP_176798561.1	ABC transporter substrate-binding protein	-
FDP16_RS03260 (FDP16_03380)	-	640184..641053 (+)	870	WP_176798562.1	branched-chain amino acid ABC transporter permease	-
FDP16_RS03265 (FDP16_03385)	-	641057..642010 (+)	954	WP_125331161.1	branched-chain amino acid ABC transporter permease	-
FDP16_RS03270 (FDP16_03390)	-	642010..642774 (+)	765	WP_176798563.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 22712.94 Da
• Isoelectric Point: 4.7792

>NTDB_id=323284 FDP16_RS03245 WP_256254472.1 637646..638263(+) (clpP) [Streptococcus sanguinis strain CGMH058]
MLKREREKTMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSA
GLAIVDTMNFIKSDVQTIVMGVAASMGTVIASSGAKGKRFMLPNAEYLIHQPMGGAGSGTQQTDMAIVAEHLLRTRNTLE
KILAENSGKSVEQIHKDAERDYWMSAQETLEYGFIDEIMENSNLS

Nucleotide

• Length: 618 bp

>NTDB_id=323284 FDP16_RS03245 WP_256254472.1 637646..638263(+) (clpP) [Streptococcus sanguinis strain CGMH058]
ATTTTAAAAAGAGAAAGAGAGAAAACTATGATTCCTGTAGTTATTGAACAAACCAGCCGAGGGGAGCGCTCCTATGACAT
TTATTCTCGGCTATTAAAAGATCGGATTATCATGCTGACTGGTCCAGTAGAGGATAATATGGCTAATTCAATCATTGCCC
AGCTCCTTTTCTTGGATGCACAGGACAATACTAAAGATATTTATCTCTATGTAAATACGCCGGGTGGTTCTGTTTCAGCA
GGTCTGGCTATTGTGGACACTATGAACTTCATCAAGTCTGATGTTCAGACCATTGTTATGGGTGTAGCTGCCAGCATGGG
AACGGTCATTGCTTCCAGTGGTGCCAAAGGCAAACGCTTCATGCTTCCAAATGCAGAATATCTGATTCACCAGCCGATGG
GCGGAGCTGGAAGCGGCACTCAGCAAACGGATATGGCAATTGTAGCTGAGCACTTGCTTAGAACTCGGAATACCTTGGAA
AAAATCTTGGCAGAAAACTCTGGTAAGTCTGTTGAGCAAATCCACAAGGATGCAGAGCGTGATTACTGGATGAGTGCTCA
AGAAACTTTGGAATACGGCTTTATTGACGAAATCATGGAAAATAGCAATTTAAGCTAA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (20-201)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pneumoniae R6	90.306	95.61	0.863
clpP	Streptococcus pneumoniae Rx1	90.306	95.61	0.863
clpP	Streptococcus pneumoniae D39	90.306	95.61	0.863
clpP	Streptococcus pneumoniae TIGR4	90.306	95.61	0.863
clpP	Streptococcus pyogenes JRS4	89.744	95.122	0.854
clpP	Streptococcus pyogenes MGAS315	89.744	95.122	0.854
clpP	Streptococcus mutans UA159	87.5	97.561	0.854
clpP	Streptococcus thermophilus LMG 18311	88.718	95.122	0.844
clpP	Streptococcus thermophilus LMD-9	88.718	95.122	0.844
clpP	Lactococcus lactis subsp. cremoris KW2	87.692	95.122	0.834
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	87.179	95.122	0.829
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.104	94.146	0.566
clpP	Bacillus subtilis subsp. subtilis str. 168	56.995	94.146	0.537