Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   EB817_RS01595 Genome accession   NZ_CP033336
Coordinates   287663..288214 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY165     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 282663..293214
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EB817_RS01595 (EB817_01595) comX/sigX/comX2/sigX2 287663..288214 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  EB817_RS01600 (EB817_01600) - 288774..289301 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  EB817_RS01605 (EB817_01605) yqeH 289301..290419 (+) 1119 WP_129304455.1 ribosome biogenesis GTPase YqeH -
  EB817_RS01610 (EB817_01610) yhbY 290444..290752 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  EB817_RS01615 (EB817_01615) - 290821..291453 (+) 633 WP_011184179.1 nicotinate-nucleotide adenylyltransferase -
  EB817_RS01620 (EB817_01620) yqeK 291450..292043 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  EB817_RS01625 (EB817_01625) rsfS 292067..292420 (+) 354 WP_011017339.1 ribosome silencing factor -
  EB817_RS01630 (EB817_01630) - 292468..293211 (+) 744 WP_002991831.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=323064 EB817_RS01595 WP_010921894.1 287663..288214(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain TSPY165]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=323064 EB817_RS01595 WP_010921894.1 287663..288214(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain TSPY165]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTAAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTTCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.