Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | D0856_RS11070 | Genome accession | NZ_CP033144 |
| Coordinates | 2280782..2281081 (-) | Length | 99 a.a. |
| NCBI ID | WP_020196004.1 | Uniprot ID | A0A0C1VUB7 |
| Organism | Vibrio owensii strain V180403 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2275782..2286081
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0856_RS11045 (D0856_11045) | - | 2276246..2277460 (+) | 1215 | WP_005437583.1 | pyridoxal phosphate-dependent aminotransferase | - |
| D0856_RS11050 (D0856_11050) | yfbR | 2277544..2278128 (+) | 585 | WP_009707166.1 | 5'-deoxynucleotidase | - |
| D0856_RS11055 (D0856_11055) | - | 2278132..2279466 (+) | 1335 | WP_172666196.1 | anti-phage deoxyguanosine triphosphatase | - |
| D0856_RS11060 (D0856_11060) | - | 2279487..2280104 (-) | 618 | WP_122067930.1 | DTW domain-containing protein | - |
| D0856_RS11065 (D0856_11065) | rrtA | 2280108..2280659 (+) | 552 | WP_020196003.1 | rhombosortase | - |
| D0856_RS11070 (D0856_11070) | comEA | 2280782..2281081 (-) | 300 | WP_020196004.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| D0856_RS11075 (D0856_11075) | ppiD | 2281228..2283087 (-) | 1860 | WP_041054820.1 | peptidylprolyl isomerase | - |
| D0856_RS11080 (D0856_11080) | - | 2283303..2283575 (-) | 273 | WP_005430934.1 | HU family DNA-binding protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10819.59 Da Isoelectric Point: 7.9988
>NTDB_id=321829 D0856_RS11070 WP_020196004.1 2280782..2281081(-) (comEA) [Vibrio owensii strain V180403]
MKWMLTLCLLLLAPMSWAEEGKSVTTKAAKYEGIEITVNVNTASAEEIATLLNGIGTKKAQDIVEYRNEHGPFKTAADLS
KVKGIGEATVKKNQDRILL
MKWMLTLCLLLLAPMSWAEEGKSVTTKAAKYEGIEITVNVNTASAEEIATLLNGIGTKKAQDIVEYRNEHGPFKTAADLS
KVKGIGEATVKKNQDRILL
Nucleotide
Download Length: 300 bp
>NTDB_id=321829 D0856_RS11070 WP_020196004.1 2280782..2281081(-) (comEA) [Vibrio owensii strain V180403]
ATGAAATGGATGTTAACACTGTGCTTGCTGCTATTGGCGCCAATGAGTTGGGCGGAAGAAGGCAAGTCGGTAACGACAAA
AGCGGCCAAGTATGAAGGCATTGAAATCACCGTTAATGTGAATACGGCTTCCGCGGAAGAAATTGCGACACTACTGAATG
GTATTGGGACGAAAAAAGCGCAAGACATTGTTGAGTACCGAAATGAACATGGCCCATTTAAAACCGCAGCGGACTTAAGC
AAAGTGAAAGGCATTGGTGAAGCGACGGTGAAAAAGAACCAAGATCGTATCTTACTTTGA
ATGAAATGGATGTTAACACTGTGCTTGCTGCTATTGGCGCCAATGAGTTGGGCGGAAGAAGGCAAGTCGGTAACGACAAA
AGCGGCCAAGTATGAAGGCATTGAAATCACCGTTAATGTGAATACGGCTTCCGCGGAAGAAATTGCGACACTACTGAATG
GTATTGGGACGAAAAAAGCGCAAGACATTGTTGAGTACCGAAATGAACATGGCCCATTTAAAACCGCAGCGGACTTAAGC
AAAGTGAAAGGCATTGGTGAAGCGACGGTGAAAAAGAACCAAGATCGTATCTTACTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio campbellii strain DS40M4 |
83.838 |
100 |
0.838 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
74.747 |
100 |
0.747 |
| comEA | Vibrio cholerae C6706 |
59 |
100 |
0.596 |
| comEA | Vibrio cholerae strain A1552 |
59 |
100 |
0.596 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
43.75 |
100 |
0.495 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
39.252 |
100 |
0.424 |
| comEA | Acinetobacter baumannii strain A118 |
30.894 |
100 |
0.384 |