Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | D0812_RS08735 | Genome accession | NZ_CP033137 |
| Coordinates | 1783186..1783485 (+) | Length | 99 a.a. |
| NCBI ID | WP_020196004.1 | Uniprot ID | A0A0C1VUB7 |
| Organism | Vibrio owensii strain 1700302 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1778186..1788485
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0812_RS08725 (D0812_08725) | - | 1780692..1780964 (+) | 273 | WP_005430934.1 | HU family DNA-binding protein | - |
| D0812_RS08730 (D0812_08730) | ppiD | 1781179..1783038 (+) | 1860 | WP_054822891.1 | peptidylprolyl isomerase | - |
| D0812_RS08735 (D0812_08735) | comEA | 1783186..1783485 (+) | 300 | WP_020196004.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| D0812_RS08740 (D0812_08740) | rrtA | 1783608..1784159 (-) | 552 | WP_054822890.1 | rhombosortase | - |
| D0812_RS08745 (D0812_08745) | - | 1784163..1784780 (+) | 618 | WP_054822889.1 | DTW domain-containing protein | - |
| D0812_RS08750 (D0812_08750) | - | 1784801..1786135 (-) | 1335 | WP_194842423.1 | anti-phage deoxyguanosine triphosphatase | - |
| D0812_RS08755 (D0812_08755) | yfbR | 1786139..1786723 (-) | 585 | WP_009707166.1 | 5'-deoxynucleotidase | - |
| D0812_RS08760 (D0812_08760) | - | 1786807..1788021 (-) | 1215 | WP_005437583.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10819.59 Da Isoelectric Point: 7.9988
>NTDB_id=321748 D0812_RS08735 WP_020196004.1 1783186..1783485(+) (comEA) [Vibrio owensii strain 1700302]
MKWMLTLCLLLLAPMSWAEEGKSVTTKAAKYEGIEITVNVNTASAEEIATLLNGIGTKKAQDIVEYRNEHGPFKTAADLS
KVKGIGEATVKKNQDRILL
MKWMLTLCLLLLAPMSWAEEGKSVTTKAAKYEGIEITVNVNTASAEEIATLLNGIGTKKAQDIVEYRNEHGPFKTAADLS
KVKGIGEATVKKNQDRILL
Nucleotide
Download Length: 300 bp
>NTDB_id=321748 D0812_RS08735 WP_020196004.1 1783186..1783485(+) (comEA) [Vibrio owensii strain 1700302]
ATGAAATGGATGTTAACACTGTGCTTGCTGCTATTGGCGCCAATGAGTTGGGCGGAAGAAGGCAAGTCGGTAACGACAAA
AGCGGCCAAGTATGAAGGCATTGAAATCACCGTTAATGTGAATACGGCTTCCGCGGAAGAAATTGCGACACTACTGAATG
GTATTGGGACAAAAAAAGCGCAAGACATTGTTGAGTACCGAAATGAACATGGCCCATTTAAAACCGCAGCGGACTTAAGC
AAAGTGAAAGGCATTGGTGAAGCGACGGTGAAAAAGAACCAAGATCGTATCTTACTTTGA
ATGAAATGGATGTTAACACTGTGCTTGCTGCTATTGGCGCCAATGAGTTGGGCGGAAGAAGGCAAGTCGGTAACGACAAA
AGCGGCCAAGTATGAAGGCATTGAAATCACCGTTAATGTGAATACGGCTTCCGCGGAAGAAATTGCGACACTACTGAATG
GTATTGGGACAAAAAAAGCGCAAGACATTGTTGAGTACCGAAATGAACATGGCCCATTTAAAACCGCAGCGGACTTAAGC
AAAGTGAAAGGCATTGGTGAAGCGACGGTGAAAAAGAACCAAGATCGTATCTTACTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio campbellii strain DS40M4 |
83.838 |
100 |
0.838 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
74.747 |
100 |
0.747 |
| comEA | Vibrio cholerae C6706 |
59 |
100 |
0.596 |
| comEA | Vibrio cholerae strain A1552 |
59 |
100 |
0.596 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
43.75 |
100 |
0.495 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
39.252 |
100 |
0.424 |
| comEA | Acinetobacter baumannii strain A118 |
30.894 |
100 |
0.384 |