Detailed information NTG0319464

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: D9C14_RS04630
• Genome accession: NZ_CP032860
• Coordinates: 871912..872505 (+)
• Length: 197 a.a.
• NCBI ID: WP_038427933.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain SSJ-1
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 866912..877505

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C14_RS04600 (D9C14_04600)	psmA	867167..867502 (+)	336	WP_014480966.1	SMR family transporter	-
D9C14_RS04605 (D9C14_04605)	psmB	867502..867822 (+)	321	WP_003228222.1	QacE family quaternary ammonium compound efflux SMR transporter	-
D9C14_RS04610 (D9C14_04610)	yvdQ	867858..868370 (-)	513	WP_014478056.1	DUF3231 family protein	-
D9C14_RS04615 (D9C14_04615)	cotNP	868622..869965 (-)	1344	WP_003228217.1	FAD-binding oxidoreductase	-
D9C14_RS04620 (D9C14_04620)	cotR	870321..871283 (+)	963	WP_029725962.1	sporulation hydrolase CotR	-
D9C14_RS04630 (D9C14_04630)	clpP	871912..872505 (+)	594	WP_038427933.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
D9C14_RS04635 (D9C14_04635)	pgmB	872567..873241 (-)	675	WP_038427934.1	beta-phosphoglucomutase	-
D9C14_RS04640 (D9C14_04640)	malL	873238..874923 (-)	1686	WP_038427935.1	oligo-1,6-glucosidase	-
D9C14_RS04645 (D9C14_04645)	mdxK	874916..877189 (-)	2274	WP_121572484.1	maltose phosphorylase	-

Sequence

Protein

• Length: 197 a.a.
• Molecular weight: 21667.97 Da
• Isoelectric Point: 4.9349

>NTDB_id=319464 D9C14_RS04630 WP_038427933.1 871912..872505(+) (clpP) [Bacillus subtilis subsp. subtilis strain SSJ-1]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALDYGLIDKILTHTEDKK

Nucleotide

• Length: 594 bp

>NTDB_id=319464 D9C14_RS04630 WP_038427933.1 871912..872505(+) (clpP) [Bacillus subtilis subsp. subtilis strain SSJ-1]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTATATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGTGCGCAAGGTCAGGCGA
CAGAAATTGAAATTGCCGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTTGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGATTACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGACAAAAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	99.492	100	0.995
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.085	95.431	0.65
clpP	Streptococcus thermophilus LMG 18311	57.653	99.492	0.574
clpP	Streptococcus thermophilus LMD-9	57.653	99.492	0.574
clpP	Streptococcus pneumoniae D39	57.292	97.462	0.558
clpP	Streptococcus pneumoniae Rx1	57.292	97.462	0.558
clpP	Streptococcus pneumoniae R6	57.292	97.462	0.558
clpP	Streptococcus pneumoniae TIGR4	57.292	97.462	0.558
clpP	Streptococcus pyogenes JRS4	56.122	99.492	0.558
clpP	Streptococcus pyogenes MGAS315	56.122	99.492	0.558
clpP	Lactococcus lactis subsp. cremoris KW2	57.368	96.447	0.553
clpP	Streptococcus mutans UA159	54.822	100	0.548
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.263	96.447	0.533