Detailed information NTG0317110

Bioinformatically predicted

Overview

• Name: amiC
• Type: Regulator
• Locus tag: D7D50_RS00940
• Genome accession: NZ_CP032620
• Coordinates: 167338..168837 (-)
• Length: 499 a.a.
• NCBI ID: WP_120701231.1
• Uniprot ID: -
• Organism: Streptococcus koreensis strain KCOM 2890 (=JS71)
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 162338..173837

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D7D50_RS00925 (D7D50_00925)	amiF	164400..165323 (-)	924	WP_120701229.1	ATP-binding cassette domain-containing protein	Regulator
D7D50_RS00930 (D7D50_00930)	amiE	165333..166400 (-)	1068	WP_120701230.1	ABC transporter ATP-binding protein	Regulator
D7D50_RS00935 (D7D50_00935)	amiD	166412..167338 (-)	927	WP_117745255.1	oligopeptide ABC transporter permease OppC	Regulator
D7D50_RS00940 (D7D50_00940)	amiC	167338..168837 (-)	1500	WP_120701231.1	ABC transporter permease	Regulator
D7D50_RS00945 (D7D50_00945)	amiA3	168902..170887 (-)	1986	WP_120701232.1	peptide ABC transporter substrate-binding protein	Regulator
D7D50_RS00950 (D7D50_00950)	amiA3	171079..173043 (-)	1965	WP_120701233.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 499 a.a.
• Molecular weight: 55675.92 Da
• Isoelectric Point: 10.0093

>NTDB_id=317110 D7D50_RS00940 WP_120701231.1 167338..168837(-) (amiC) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
MKKYIFMRILRSLVSIFLVTTLTYTIIYTLTPRNLIFKNDPNYNKIAKTKDSKINYENTVYDRMGYIEYLDSKALKEKAS
KEDSSVTVEPTKENEKIYKKYISNLGNGWVLKRFPENKGFYATREVPVFERVIGFYGNLIQIDHPNVIKDASNPKLERYI
RIENDPAIGWSVVGSGTKHKYLLYFNGQFPFIHQNFVSLNLGESYPTYSNTPVLQVITQGQGTTKKSEVNFPTGKKESSI
NIYSRIYKSPSKADAQDIARFGEGDAYTATLSNYENPSMIVSSAIIGLIGIAIAYLIAIPLGSYMALLKNTWFDSASTAT
LTFMMSLPTIALVYIVRLAGSSIGLPDSFPVLGAQDWRSYVLPSVILGLLSAPGLAVWIRRYMIDLHSQDFVRFARAKGL
SEKEISRKHIFKNAMVPIVTGIPVQLVLVISGATLTETVFAFPGMGKMLIDSIKASNNTMVVGLVFIFTVLAVFGAMAGD
ILMVMVDPRIKLTTKKGGK

Nucleotide

• Length: 1500 bp

>NTDB_id=317110 D7D50_RS00940 WP_120701231.1 167338..168837(-) (amiC) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
ATGAAAAAATATATATTTATGCGTATTTTGCGTTCGTTAGTGTCGATCTTTTTGGTTACGACATTGACCTATACAATTAT
TTATACGCTAACCCCAAGAAATTTAATTTTCAAAAACGACCCTAACTATAATAAGATTGCGAAAACAAAAGACTCTAAAA
TCAATTATGAAAATACAGTCTATGATCGCATGGGGTATATAGAATATCTTGATTCAAAAGCTTTGAAAGAAAAAGCAAGC
AAGGAAGACTCATCAGTAACAGTAGAGCCTACTAAAGAAAACGAGAAGATCTACAAAAAGTACATTTCTAACCTTGGAAA
TGGCTGGGTATTGAAACGTTTCCCTGAAAACAAAGGTTTTTACGCTACTCGTGAAGTCCCTGTCTTTGAACGTGTTATTG
GATTCTATGGTAATCTGATTCAGATTGACCATCCAAATGTCATCAAAGATGCTTCCAATCCAAAACTTGAACGCTATATT
CGCATTGAAAATGACCCAGCTATTGGTTGGTCAGTAGTTGGTTCAGGGACTAAACATAAATATCTATTGTACTTCAATGG
TCAATTCCCGTTCATTCATCAAAACTTTGTATCCTTAAACTTGGGTGAATCTTACCCAACTTATTCAAATACGCCAGTTC
TTCAGGTTATTACACAAGGACAAGGTACGACTAAGAAGAGTGAAGTAAACTTCCCAACAGGGAAAAAAGAATCTTCTATC
AATATTTACTCACGTATATACAAATCACCAAGTAAGGCAGATGCTCAAGATATCGCCCGCTTTGGTGAAGGAGATGCTTA
TACAGCAACATTGAGCAACTATGAAAATCCATCCATGATTGTGAGCTCAGCCATTATCGGTTTAATCGGGATTGCGATTG
CCTACTTGATTGCTATTCCATTGGGATCTTACATGGCCTTGTTGAAGAATACTTGGTTTGATAGTGCATCTACGGCAACT
TTAACATTTATGATGTCATTGCCGACGATTGCCTTGGTTTACATCGTTCGCTTGGCTGGCTCTTCTATCGGCTTACCAGA
TTCCTTCCCAGTGTTAGGAGCTCAGGATTGGCGCTCTTATGTACTACCTTCTGTGATTTTGGGTCTCTTGAGTGCACCAG
GATTGGCAGTTTGGATTCGCCGTTACATGATCGACTTGCATTCTCAAGACTTTGTCCGTTTTGCACGTGCCAAAGGGCTT
TCTGAGAAAGAAATTTCCCGCAAACATATCTTCAAAAACGCCATGGTTCCGATCGTTACAGGGATTCCTGTTCAATTGGT
TCTAGTCATTTCAGGGGCAACTTTGACAGAAACTGTCTTTGCCTTCCCTGGTATGGGTAAAATGTTGATTGATTCTATCA
AGGCATCCAATAATACCATGGTAGTTGGTCTTGTCTTCATCTTTACTGTTCTTGCTGTATTTGGAGCAATGGCTGGAGAT
ATCCTTATGGTTATGGTAGACCCTCGTATCAAACTAACAACTAAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (298-491)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiC	Streptococcus salivarius strain HSISS4	72.545	100	0.725
amiC	Streptococcus thermophilus LMD-9	72.144	100	0.721
amiC	Streptococcus thermophilus LMG 18311	72.144	100	0.721